G684789



Basic Information


Item Value
gene id G684789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21383918 ~ 21384286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU779803
ccacggcccggagcctccggcgacaaTCCACGCTCCGGTTCCTCAGGTGACGATCCActgtccggttcctccggcgacgatccacggtccggttcctccggcgacgatccacggtccggagtccTCGGCGACGATCCAccgtccggttcctccggcgacgatccacggtccggagcctcctgcgATGATCCGCGGTCCGGTTTCACGGAAGCGGAGGGATCAGCAAGCGGAGCGGGGTCTACGCCCCGAACCGGCGCCACACCGAggctagatgcccacccggaccctccctcctagtcaggttttgcg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU779803 True 309 lncRNA 0.69 2 21383918 21384286

Neighbor


gene id symbol gene type direction distance location
si:dkeyp-114g9.1 fbos coding downstream 142768 21231292 ~ 21241150 (-)
LOC110529586 NA coding downstream 186720 21187530 ~ 21197198 (-)
LOC118965500 NA coding downstream 731374 20650227 ~ 20652544 (-)
LOC118965600 NA coding downstream 736389 20644656 ~ 20647529 (-)
LOC110529578 cx32 coding downstream 739720 20642316 ~ 20644198 (-)
LOC110529588 ngbr coding upstream 8052 21392338 ~ 21401110 (-)
LOC110529589 LOC106571387 coding upstream 17657 21401943 ~ 21406071 (-)
LOC110529592 LOC106571389 coding upstream 41333 21425619 ~ 21469294 (-)
LOC110529593 LOC106571390 coding upstream 115179 21499465 ~ 21504647 (-)
LOC110529205 LOC106571539 coding upstream 155596 21539882 ~ 21545761 (-)
G684690 NA non-coding downstream 92013 21287752 ~ 21291905 (-)
G684714 NA non-coding downstream 107217 21276176 ~ 21276701 (-)
G684268 NA non-coding downstream 375293 21008334 ~ 21008625 (-)
G684258 NA non-coding downstream 385121 20998486 ~ 20998797 (-)
G684791 NA non-coding upstream 2844 21387130 ~ 21387516 (-)
G684792 NA non-coding upstream 3530 21387816 ~ 21388049 (-)
G684767 NA non-coding upstream 37508 21421794 ~ 21424539 (-)
G684837 NA non-coding upstream 87329 21471615 ~ 21471826 (-)
G681659 NA other downstream 2591781 18791230 ~ 18792137 (-)
G679471 NA other downstream 4269390 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 4753659 16625090 ~ 16630259 (-)
G679087 NA other downstream 4950904 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 6867390 14508329 ~ 14516528 (-)
G684844 NA other upstream 94480 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 536141 21920427 ~ 21926307 (-)
G685953 NA other upstream 774744 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 2232621 23614938 ~ 23659111 (-)
G687890 NA other upstream 2251023 23635309 ~ 23637408 (-)

Expression


G684789 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G684789 Expression in each Bioproject

Bar chart with 14 bars.
G684789 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network