G684547


Basic Information

Item Value
gene id G684547
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21388003 ~ 21388217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU779471
GAATGTAAGCAATTTATGTTTATTTCTGTTTCATGATGTGATTTGTGAAATGAATGCAGTCATTTTATTGGGATGGGTCCtacacaggcagtccaattctgatatttttcccaattattggcaaaagagctgaCCTAATTGGTccaaataccaattagtggaaaatatCCGAATTAGGCTGCGTGTGTAAACATAGCCTAGCCATAGTCTTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU779471 True 215 lncRNA 0.36 1 21388003 21388217

Neighbor

gene id symbol gene type direction distance location
LOC110529585 LOC106571383 coding upstream 157893 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 251178 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 271706 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 395645 20825514 ~ 20992358 (+)
LOC110529580 tbc1d32 coding upstream 705004 20652867 ~ 20682999 (+)
LOC110529590 LOC106571388 coding downstream 17975 21406192 ~ 21424564 (+)
LOC110531076 LOC106571392 coding downstream 324943 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 383846 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 391653 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 400999 21789216 ~ 21816690 (+)
G684413 NA non-coding upstream 197834 21187182 ~ 21190169 (+)
G684400 NA non-coding upstream 265131 21122138 ~ 21122872 (+)
G684314 NA non-coding upstream 310130 21077070 ~ 21078871 (+)
G684269 NA non-coding upstream 378686 21008957 ~ 21009317 (+)
G684267 NA non-coding upstream 379153 21008585 ~ 21008850 (+)
G684548 NA non-coding downstream 1654 21389871 ~ 21392904 (+)
G684554 LOC106571387 non-coding downstream 14733 21402950 ~ 21403576 (+)
G684860 NA non-coding downstream 101322 21489539 ~ 21489980 (+)
G684878 NA non-coding downstream 111295 21499512 ~ 21500950 (+)
G683845 NA other upstream 680632 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 755104 20626950 ~ 20632899 (+)
G683669 NA other upstream 824569 20562875 ~ 20563434 (+)
G682611 NA other upstream 1658332 19728833 ~ 19729671 (+)
G685215 NA other downstream 536900 21925117 ~ 21926356 (+)
G685311 NA other downstream 695657 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 1034841 22419790 ~ 22433035 (+)
G685469 NA other downstream 1058554 22446771 ~ 22448073 (+)

Expression


Co-expression Network