G684860


Basic Information

Item Value
gene id G684860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21489539 ~ 21489980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU779874
gcgcagtggttaagggcgctgtactgcagcgccagctgtgccatcagagtccctgggtttgcgcccaggctctgtcgtaaccggccgcgaccgggaggtccatggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggtcggtaggggtgtccttgtctcatcgcgcactagcgactcctgtggcgggctgggcgcagtgtacgctagtccaaggtggccaggtgcacggtgtttcctccggcgcattggctggcttccaggttggatgtgcgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctacaacaattggataccacgaaattggggagaaaaagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU779874 True 442 lncRNA 0.60 1 21489539 21489980

Neighbor

gene id symbol gene type direction distance location
LOC110529590 LOC106571388 coding upstream 66682 21406192 ~ 21424564 (+)
LOC110529585 LOC106571383 coding upstream 259429 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 352714 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 373242 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 497181 20825514 ~ 20992358 (+)
LOC110531076 LOC106571392 coding downstream 223180 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 282083 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 289890 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 299236 21789216 ~ 21816690 (+)
LOC110529600 LOC106571396 coding downstream 384419 21874399 ~ 21876744 (+)
G684554 LOC106571387 non-coding upstream 85963 21402950 ~ 21403576 (+)
G684548 NA non-coding upstream 96635 21389871 ~ 21392904 (+)
G684547 NA non-coding upstream 101322 21388003 ~ 21388217 (+)
G684413 NA non-coding upstream 299370 21187182 ~ 21190169 (+)
G684878 NA non-coding downstream 9532 21499512 ~ 21500950 (+)
G684879 LOC106571390 non-coding downstream 11450 21501430 ~ 21501894 (+)
G684881 NA non-coding downstream 14345 21504325 ~ 21504585 (+)
G684892 NA non-coding downstream 33823 21523803 ~ 21524079 (+)
G684896 NA non-coding downstream 39955 21529935 ~ 21530143 (+)
G684314 NA other upstream 410668 21077070 ~ 21078871 (+)
G683845 NA other upstream 782168 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 856640 20626950 ~ 20632899 (+)
G683669 NA other upstream 926105 20562875 ~ 20563434 (+)
G685215 NA other downstream 435137 21925117 ~ 21926356 (+)
G685311 NA other downstream 593894 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 933078 22419790 ~ 22433035 (+)
G685469 NA other downstream 956791 22446771 ~ 22448073 (+)
G685551 NA other downstream 990343 22480323 ~ 22482139 (+)

Expression


Co-expression Network