Gene
RNA
| Item | Value |
|---|---|
| gene id | G685004 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 21520123 ~ 21520354 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transposon Tf2-1 polyprotein |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU780037 | True | 232 | lncRNA | 0.63 | 1 | 21520123 | 21520354 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529593 | LOC106571390 | coding | downstream | 15476 | 21499465 ~ 21504647 (-) |
| LOC110529592 | LOC106571389 | coding | downstream | 50829 | 21425619 ~ 21469294 (-) |
| LOC110529589 | LOC106571387 | coding | downstream | 114052 | 21401943 ~ 21406071 (-) |
| LOC110529588 | ngbr | coding | downstream | 119013 | 21392338 ~ 21401110 (-) |
| LOC110529587 | LOC106571386 | coding | downstream | 134520 | 21247152 ~ 21385603 (-) |
| LOC110529205 | LOC106571539 | coding | upstream | 19528 | 21539882 ~ 21545761 (-) |
| trnal-cag-4 | NA | coding | upstream | 33704 | 21554058 ~ 21554140 (-) |
| afdna | LOC106571391 | coding | upstream | 38604 | 21558958 ~ 21688064 (-) |
| LOC110529598 | s22a2 | coding | upstream | 296358 | 21816712 ~ 21822446 (-) |
| LOC110529599 | LOC106571395 | coding | upstream | 312174 | 21832528 ~ 21872462 (-) |
| G684864 | NA | non-coding | downstream | 28197 | 21491709 ~ 21491926 (-) |
| G684863 | NA | non-coding | downstream | 28551 | 21491290 ~ 21491572 (-) |
| G684837 | NA | non-coding | downstream | 48297 | 21471615 ~ 21471826 (-) |
| G684767 | NA | non-coding | downstream | 95584 | 21421794 ~ 21424539 (-) |
| G685006 | NA | non-coding | upstream | 1391 | 21521745 ~ 21522034 (-) |
| G685013 | NA | non-coding | upstream | 9807 | 21530161 ~ 21530509 (-) |
| G685017 | NA | non-coding | upstream | 15703 | 21536057 ~ 21536342 (-) |
| G685018 | NA | non-coding | upstream | 16226 | 21536580 ~ 21536886 (-) |
| G685020 | NA | non-coding | upstream | 17372 | 21537726 ~ 21538063 (-) |
| G684844 | NA | other | downstream | 40920 | 21478766 ~ 21479203 (-) |
| G681659 | NA | other | downstream | 2727986 | 18791230 ~ 18792137 (-) |
| G679471 | NA | other | downstream | 4405595 | 17113543 ~ 17114528 (-) |
| G679210 | LOC106571290 | other | downstream | 4889864 | 16625090 ~ 16630259 (-) |
| G679087 | NA | other | downstream | 5087109 | 16432621 ~ 16433014 (-) |
| LOC110529207 | sprtn | other | upstream | 400073 | 21920427 ~ 21926307 (-) |
| G685953 | NA | other | upstream | 638676 | 22159030 ~ 22161042 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 2096553 | 23614938 ~ 23659111 (-) |
| G687890 | NA | other | upstream | 2114955 | 23635309 ~ 23637408 (-) |
| G687979 | LOC106571438 | other | upstream | 2234478 | 23754832 ~ 23756910 (-) |
