Gene
RNA
| Item | Value |
|---|---|
| gene id | G685021 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 21538116 ~ 21538315 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU780054 | True | 200 | lncRNA | 0.40 | 1 | 21538116 | 21538315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529593 | LOC106571390 | coding | downstream | 33469 | 21499465 ~ 21504647 (-) |
| LOC110529592 | LOC106571389 | coding | downstream | 68822 | 21425619 ~ 21469294 (-) |
| LOC110529589 | LOC106571387 | coding | downstream | 132045 | 21401943 ~ 21406071 (-) |
| LOC110529588 | ngbr | coding | downstream | 137006 | 21392338 ~ 21401110 (-) |
| LOC110529587 | LOC106571386 | coding | downstream | 152513 | 21247152 ~ 21385603 (-) |
| LOC110529205 | LOC106571539 | coding | upstream | 1567 | 21539882 ~ 21545761 (-) |
| trnal-cag-4 | NA | coding | upstream | 15743 | 21554058 ~ 21554140 (-) |
| afdna | LOC106571391 | coding | upstream | 20643 | 21558958 ~ 21688064 (-) |
| LOC110529598 | s22a2 | coding | upstream | 278397 | 21816712 ~ 21822446 (-) |
| LOC110529599 | LOC106571395 | coding | upstream | 294213 | 21832528 ~ 21872462 (-) |
| G685020 | NA | non-coding | downstream | 53 | 21537726 ~ 21538063 (-) |
| G685018 | NA | non-coding | downstream | 1230 | 21536580 ~ 21536886 (-) |
| G685017 | NA | non-coding | downstream | 1774 | 21536057 ~ 21536342 (-) |
| G685013 | NA | non-coding | downstream | 7607 | 21530161 ~ 21530509 (-) |
| G685006 | NA | non-coding | downstream | 16082 | 21521745 ~ 21522034 (-) |
| G685049 | NA | non-coding | upstream | 86912 | 21625227 ~ 21625697 (-) |
| G685087 | NA | non-coding | upstream | 160350 | 21698665 ~ 21698916 (-) |
| G685098 | NA | non-coding | upstream | 168593 | 21706908 ~ 21707110 (-) |
| G685696 | NA | non-coding | upstream | 176972 | 21715287 ~ 21722130 (-) |
| G684844 | NA | other | downstream | 58913 | 21478766 ~ 21479203 (-) |
| G681659 | NA | other | downstream | 2745979 | 18791230 ~ 18792137 (-) |
| G679471 | NA | other | downstream | 4423588 | 17113543 ~ 17114528 (-) |
| G679210 | LOC106571290 | other | downstream | 4907857 | 16625090 ~ 16630259 (-) |
| G679087 | NA | other | downstream | 5105102 | 16432621 ~ 16433014 (-) |
| LOC110529207 | sprtn | other | upstream | 382112 | 21920427 ~ 21926307 (-) |
| G685953 | NA | other | upstream | 620715 | 22159030 ~ 22161042 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 2078592 | 23614938 ~ 23659111 (-) |
| G687890 | NA | other | upstream | 2096994 | 23635309 ~ 23637408 (-) |
| G687979 | LOC106571438 | other | upstream | 2216517 | 23754832 ~ 23756910 (-) |
