G684905


Basic Information

Item Value
gene id G684905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21541796 ~ 21542068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU779919
TACCTGCATTTCTCATGTATTTATCTAGGATATTCTGGAGGTCTTGTTCTTTGTCATTGTTGAATTGTGTCTCAATAGCCAGAAGGATATACTCATCCAGCAGCATGCGGATTAGGTGGAACGAACCTGGgatgaaaaaaaaacacatcttaGTTTGCTACTAGCATAACAACCTCTTACTGTCCTAGTTTTTCCCACCAGAAATCAACCTATTATCTTATCACATTTTTCTGAAGCTCAGATGTGCACTATCATGACAGAATATCCAAATAT

Function

NR:

description
hypothetical protein Z043_106433, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU779919 True 273 lncRNA 0.37 1 21541796 21542068

Neighbor

gene id symbol gene type direction distance location
LOC110529590 LOC106571388 coding upstream 118939 21406192 ~ 21424564 (+)
LOC110529585 LOC106571383 coding upstream 311686 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 404971 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 425499 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 549438 20825514 ~ 20992358 (+)
LOC110531076 LOC106571392 coding downstream 171092 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 229995 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 237802 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 247148 21789216 ~ 21816690 (+)
LOC110529600 LOC106571396 coding downstream 332331 21874399 ~ 21876744 (+)
G684904 NA non-coding upstream 3489 21538051 ~ 21538307 (+)
G684903 NA non-coding upstream 4636 21536878 ~ 21537160 (+)
G684896 NA non-coding upstream 11653 21529935 ~ 21530143 (+)
G684892 NA non-coding upstream 17717 21523803 ~ 21524079 (+)
G684881 NA non-coding upstream 37211 21504325 ~ 21504585 (+)
G684908 NA non-coding downstream 3500 21545568 ~ 21545804 (+)
G684920 NA non-coding downstream 17566 21559634 ~ 21560627 (+)
G684922 LOC106571391 non-coding downstream 18755 21560823 ~ 21564813 (+)
G684926 NA non-coding downstream 40931 21582999 ~ 21583393 (+)
G685078 NA non-coding downstream 149216 21691284 ~ 21691592 (+)
G684314 NA other upstream 462925 21077070 ~ 21078871 (+)
G683845 NA other upstream 834425 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 908897 20626950 ~ 20632899 (+)
G683669 NA other upstream 978362 20562875 ~ 20563434 (+)
G685215 NA other downstream 383049 21925117 ~ 21926356 (+)
G685311 NA other downstream 541806 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 880990 22419790 ~ 22433035 (+)
G685469 NA other downstream 904703 22446771 ~ 22448073 (+)
G685551 NA other downstream 938255 22480323 ~ 22482139 (+)

Expression


Co-expression Network