G684922 (LOC106571391)


Basic Information

Item Value
gene id G684922
gene name LOC106571391
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21560823 ~ 21564813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU779936
CCACTTTTCTCGCGGGTCCTTGTAAACTTCTCCTGATCCTACAAGCCCGGTTGTGTTTCCAGTGTATGAATGAAATCTTTAAAGTTGCCTGTCGGGATGAAGCTGAGGCTGGGTTtgatgggagggggagggggctgCCCTGCAGTACTGTTGGCATTGACAGCCGGCGGCTGGAATGAGCTGGACAGAAAGATCCCATCAGACATAGGACGGGGCTTGCGCGCAGGCGGCTGCGGCTTGTGCGCGGGCGGGAGGTCGCCATAGGACTTCCTGGTGGAGGAGAGCTTAACCTGACCTGCTAGGCCTGTAGTGTCCTCATCCTCCTCGTCATTGTACGAGACAAACTTGGCAGTGTACAAGGCGTCAGGGGAGACGACCTGGGTTTTGAGGTAGGAAGTGTTTCTCTGAGGCGGGGGTGGTGGAGCGTTAGTGGCAGTGGTTGCGGGGGATGCAGTGGGAGGGGGGGGCTGAGGCTGGTAGTCCCTGGGGAGGGGAGGTCTGTACAGACCAGGCTCGTCAGGCGTCAGCAGCTTGCGCTCGGCCTCCTCGTGCTGCCGGCGCCGCCCTTCCTCCAGACGTGTGTAGtactcctcctcctgcctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU779936 True 603 lncRNA 0.60 2 21560823 21564813

Neighbor

gene id symbol gene type direction distance location
LOC110529590 LOC106571388 coding upstream 137966 21406192 ~ 21424564 (+)
LOC110529585 LOC106571383 coding upstream 330713 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 423998 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 444526 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 568465 20825514 ~ 20992358 (+)
LOC110531076 LOC106571392 coding downstream 148347 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 207250 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 215057 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 224403 21789216 ~ 21816690 (+)
LOC110529600 LOC106571396 coding downstream 309586 21874399 ~ 21876744 (+)
G684920 NA non-coding upstream 196 21559634 ~ 21560627 (+)
G684908 NA non-coding upstream 15019 21545568 ~ 21545804 (+)
G684905 NA non-coding upstream 18755 21541796 ~ 21542068 (+)
G684904 NA non-coding upstream 22516 21538051 ~ 21538307 (+)
G684903 NA non-coding upstream 23663 21536878 ~ 21537160 (+)
G684926 NA non-coding downstream 18186 21582999 ~ 21583393 (+)
G685078 NA non-coding downstream 126471 21691284 ~ 21691592 (+)
G685084 NA non-coding downstream 130059 21694872 ~ 21695102 (+)
G685112 NA non-coding downstream 165953 21730766 ~ 21731008 (+)
G685116 NA non-coding downstream 183699 21748512 ~ 21749034 (+)
G684314 NA other upstream 481952 21077070 ~ 21078871 (+)
G683845 NA other upstream 853452 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 927924 20626950 ~ 20632899 (+)
G683669 NA other upstream 997389 20562875 ~ 20563434 (+)
G685215 NA other downstream 360304 21925117 ~ 21926356 (+)
G685311 NA other downstream 519061 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 858245 22419790 ~ 22433035 (+)
G685469 NA other downstream 881958 22446771 ~ 22448073 (+)
G685551 NA other downstream 915510 22480323 ~ 22482139 (+)

Expression


Co-expression Network