G685078


Basic Information

Item Value
gene id G685078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21691284 ~ 21691592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780114
CTTTAAAACATATCAATATTTAGGGGAAAGGTGTACCTATTCCCACTGTCATCATTTTAAGGATGCTGAAACACTACTGTATTAACACTCTGTGCTGTATTCTGTGGCCACTGAGGTGGAGACATACTGTATAACCCCAGACCGGAAGTTATCTGCTAATATGGTTTCCTGCTGTGGTTTTAACTTCTACTGTGTCAGACAGAACTTTTTCAGTTCAGTATATACTTCCACACATATTTAGTCATTCTGAATAGGTTTACAGTAGGTTATCAACAACTCAATGGTTAATAGCCTACTTTTGGTTAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780114 True 309 lncRNA 0.37 1 21691284 21691592

Neighbor

gene id symbol gene type direction distance location
LOC110529590 LOC106571388 coding upstream 268427 21406192 ~ 21424564 (+)
LOC110529585 LOC106571383 coding upstream 461174 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 554459 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 574987 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 698926 20825514 ~ 20992358 (+)
LOC110531076 LOC106571392 coding downstream 21568 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 80471 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 88278 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 97624 21789216 ~ 21816690 (+)
LOC110529600 LOC106571396 coding downstream 182807 21874399 ~ 21876744 (+)
G684926 NA non-coding upstream 107891 21582999 ~ 21583393 (+)
G684922 LOC106571391 non-coding upstream 126471 21560823 ~ 21564813 (+)
G684920 NA non-coding upstream 130657 21559634 ~ 21560627 (+)
G684908 NA non-coding upstream 145480 21545568 ~ 21545804 (+)
G684905 NA non-coding upstream 149216 21541796 ~ 21542068 (+)
G685084 NA non-coding downstream 3280 21694872 ~ 21695102 (+)
G685112 NA non-coding downstream 39174 21730766 ~ 21731008 (+)
G685116 NA non-coding downstream 56920 21748512 ~ 21749034 (+)
G685160 NA non-coding downstream 131201 21822793 ~ 21823017 (+)
G685162 NA non-coding downstream 131970 21823562 ~ 21823767 (+)
G684314 NA other upstream 612413 21077070 ~ 21078871 (+)
G683845 NA other upstream 983913 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1058385 20626950 ~ 20632899 (+)
G683669 NA other upstream 1127850 20562875 ~ 20563434 (+)
G685215 NA other downstream 233525 21925117 ~ 21926356 (+)
G685311 NA other downstream 392282 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 731466 22419790 ~ 22433035 (+)
G685469 NA other downstream 755179 22446771 ~ 22448073 (+)
G685551 NA other downstream 788731 22480323 ~ 22482139 (+)

Expression


Co-expression Network