G685084


Basic Information

Item Value
gene id G685084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21694872 ~ 21695102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780120
GTCATAGAACAGAAACCGAAAGAGACTCATTACCAGTGAGTCGTTTTTACCTGTGTCTGCCAGTGCCACCCACACATTTAACATTCTTtacagaaggaggaggaggagagaggggctaaATATCACATATGGTTTGTGGTGTCCAGTTCCATTTGTGGAGTAAGGGAGGGCAGTAATCTGGAAGGGTGCCTGGtattagagaggaggtagagtacAGTTGGCACTAAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780120 True 231 lncRNA 0.47 1 21694872 21695102

Neighbor

gene id symbol gene type direction distance location
LOC110529590 LOC106571388 coding upstream 272015 21406192 ~ 21424564 (+)
LOC110529585 LOC106571383 coding upstream 464762 21143069 ~ 21230110 (+)
mcm9 LOC106571380 coding upstream 558047 21117379 ~ 21136825 (+)
LOC110529583 LOC106571378 coding upstream 578575 21010321 ~ 21116297 (+)
LOC110529582 LOC106571376 coding upstream 702514 20825514 ~ 20992358 (+)
LOC110531076 LOC106571392 coding downstream 18058 21713160 ~ 21722182 (+)
LOC110529595 LOC106571393 coding downstream 76961 21772063 ~ 21774545 (+)
LOC110529596 LOC106571393 coding downstream 84768 21779870 ~ 21782714 (+)
LOC110529597 LOC106571394 coding downstream 94114 21789216 ~ 21816690 (+)
LOC110529600 LOC106571396 coding downstream 179297 21874399 ~ 21876744 (+)
G685078 NA non-coding upstream 3280 21691284 ~ 21691592 (+)
G684926 NA non-coding upstream 111479 21582999 ~ 21583393 (+)
G684922 LOC106571391 non-coding upstream 130059 21560823 ~ 21564813 (+)
G684920 NA non-coding upstream 134245 21559634 ~ 21560627 (+)
G684908 NA non-coding upstream 149068 21545568 ~ 21545804 (+)
G685112 NA non-coding downstream 35664 21730766 ~ 21731008 (+)
G685116 NA non-coding downstream 53410 21748512 ~ 21749034 (+)
G685160 NA non-coding downstream 127691 21822793 ~ 21823017 (+)
G685162 NA non-coding downstream 128460 21823562 ~ 21823767 (+)
G685163 NA non-coding downstream 129454 21824556 ~ 21824773 (+)
G684314 NA other upstream 616001 21077070 ~ 21078871 (+)
G683845 NA other upstream 987501 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1061973 20626950 ~ 20632899 (+)
G683669 NA other upstream 1131438 20562875 ~ 20563434 (+)
G685215 NA other downstream 230015 21925117 ~ 21926356 (+)
G685311 NA other downstream 388772 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 727956 22419790 ~ 22433035 (+)
G685469 NA other downstream 751669 22446771 ~ 22448073 (+)
G685551 NA other downstream 785221 22480323 ~ 22482139 (+)

Expression


Co-expression Network