G685162


Basic Information

Item Value
gene id G685162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21823562 ~ 21823767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780200
atcctggactatcggaccaccattttattacgtttgcaattgcaacaaataatttgctctgaccccaaccaaggaacatcaaaagtcgtgctataaattcacagacaacacaaagattccttgatgtccttccagactccctctgtctacccaaggacgccagaggacaaaaatcagttaaccacctaactgaggaactcaattta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780200 True 206 lncRNA 0.42 1 21823562 21823767

Neighbor

gene id symbol gene type direction distance location
LOC110529597 LOC106571394 coding upstream 6872 21789216 ~ 21816690 (+)
LOC110529596 LOC106571393 coding upstream 40848 21779870 ~ 21782714 (+)
LOC110529595 LOC106571393 coding upstream 49017 21772063 ~ 21774545 (+)
LOC110531076 LOC106571392 coding upstream 101380 21713160 ~ 21722182 (+)
LOC110529590 LOC106571388 coding upstream 400705 21406192 ~ 21424564 (+)
LOC110529600 LOC106571396 coding downstream 50632 21874399 ~ 21876744 (+)
LOC110529601 LOC106571541 coding downstream 53127 21876894 ~ 21879588 (+)
LOC110529604 NA coding downstream 81244 21905011 ~ 21912494 (+)
LOC110529606 exoc8 coding downstream 103243 21927010 ~ 21929650 (+)
LOC110529607 LOC106571401 coding downstream 107275 21931042 ~ 21958665 (+)
G685160 NA non-coding upstream 545 21822793 ~ 21823017 (+)
G685116 NA non-coding upstream 74528 21748512 ~ 21749034 (+)
G685112 NA non-coding upstream 92554 21730766 ~ 21731008 (+)
G685084 NA non-coding upstream 128460 21694872 ~ 21695102 (+)
G685078 NA non-coding upstream 131970 21691284 ~ 21691592 (+)
G685163 NA non-coding downstream 789 21824556 ~ 21824773 (+)
G685164 NA non-coding downstream 1202 21824969 ~ 21825285 (+)
G685183 LOC106571395 non-coding downstream 40293 21864060 ~ 21864651 (+)
G685212 NA non-coding downstream 89806 21913573 ~ 21913824 (+)
G684314 NA other upstream 744691 21077070 ~ 21078871 (+)
G683845 NA other upstream 1116191 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1190663 20626950 ~ 20632899 (+)
G683669 NA other upstream 1260128 20562875 ~ 20563434 (+)
G685215 NA other downstream 101350 21925117 ~ 21926356 (+)
G685311 NA other downstream 260107 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 599291 22419790 ~ 22433035 (+)
G685469 NA other downstream 623004 22446771 ~ 22448073 (+)
G685551 NA other downstream 656556 22480323 ~ 22482139 (+)

Expression


Co-expression Network