G685164


Basic Information

Item Value
gene id G685164
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21824969 ~ 21825285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780202
aaatgatgtaaaatatatcactagccactttaaacaatgctacctaatataatgtttacataccctacattattcatctcatatgcatacgtatatactgtactctatatcatcgactgtatctttatgtaatacatgtatcactagccactttaaactatgccactttgtttacatactcatctcatttgtacatactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattatttatccccttacactgtgtacaagacagtagttttggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780202 True 317 lncRNA 0.32 1 21824969 21825285

Neighbor

gene id symbol gene type direction distance location
LOC110529597 LOC106571394 coding upstream 8279 21789216 ~ 21816690 (+)
LOC110529596 LOC106571393 coding upstream 42255 21779870 ~ 21782714 (+)
LOC110529595 LOC106571393 coding upstream 50424 21772063 ~ 21774545 (+)
LOC110531076 LOC106571392 coding upstream 102787 21713160 ~ 21722182 (+)
LOC110529590 LOC106571388 coding upstream 402112 21406192 ~ 21424564 (+)
LOC110529600 LOC106571396 coding downstream 49114 21874399 ~ 21876744 (+)
LOC110529601 LOC106571541 coding downstream 51609 21876894 ~ 21879588 (+)
LOC110529604 NA coding downstream 79726 21905011 ~ 21912494 (+)
LOC110529606 exoc8 coding downstream 101725 21927010 ~ 21929650 (+)
LOC110529607 LOC106571401 coding downstream 105757 21931042 ~ 21958665 (+)
G685163 NA non-coding upstream 196 21824556 ~ 21824773 (+)
G685162 NA non-coding upstream 1202 21823562 ~ 21823767 (+)
G685160 NA non-coding upstream 1952 21822793 ~ 21823017 (+)
G685116 NA non-coding upstream 75935 21748512 ~ 21749034 (+)
G685112 NA non-coding upstream 93961 21730766 ~ 21731008 (+)
G685183 LOC106571395 non-coding downstream 38775 21864060 ~ 21864651 (+)
G685212 NA non-coding downstream 88288 21913573 ~ 21913824 (+)
G685215 NA non-coding downstream 100651 21925117 ~ 21926356 (+)
G685365 NA non-coding downstream 335338 22160623 ~ 22161261 (+)
G684314 NA other upstream 746098 21077070 ~ 21078871 (+)
G683845 NA other upstream 1117598 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1192070 20626950 ~ 20632899 (+)
G683669 NA other upstream 1261535 20562875 ~ 20563434 (+)
G685311 NA other downstream 258589 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 597773 22419790 ~ 22433035 (+)
G685469 NA other downstream 621486 22446771 ~ 22448073 (+)
G685551 NA other downstream 655038 22480323 ~ 22482139 (+)

Expression


Co-expression Network