Gene
RNA
| Item | Value |
|---|---|
| gene id | G685776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 21886461 ~ 21886735 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109866662 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU780914 | True | 275 | lncRNA | 0.36 | 1 | 21886461 | 21886735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529599 | LOC106571395 | coding | downstream | 13999 | 21832528 ~ 21872462 (-) |
| LOC110529598 | s22a2 | coding | downstream | 64015 | 21816712 ~ 21822446 (-) |
| afdna | LOC106571391 | coding | downstream | 198397 | 21558958 ~ 21688064 (-) |
| trnal-cag-4 | NA | coding | downstream | 332321 | 21554058 ~ 21554140 (-) |
| LOC110529205 | LOC106571539 | coding | downstream | 340700 | 21539882 ~ 21545761 (-) |
| ttc13 | LOC106571397 | coding | upstream | 1238 | 21887973 ~ 21905043 (-) |
| LOC110529605 | LOC106571399 | coding | upstream | 28781 | 21915516 ~ 21918789 (-) |
| LOC110529207 | sprtn | coding | upstream | 34838 | 21920427 ~ 21926307 (-) |
| c8h1orf131 | cssa15h1orf131 | coding | upstream | 71470 | 21958205 ~ 21961107 (-) |
| LOC110529611 | LOC106571404 | coding | upstream | 121015 | 22007750 ~ 22288163 (-) |
| G685721 | NA | non-coding | downstream | 88439 | 21751001 ~ 21798022 (-) |
| G685740 | LOC106571393 | non-coding | downstream | 105171 | 21772241 ~ 21781290 (-) |
| G685707 | NA | non-coding | downstream | 157111 | 21728885 ~ 21729350 (-) |
| G685706 | NA | non-coding | downstream | 158195 | 21727931 ~ 21728266 (-) |
| G685705 | NA | non-coding | downstream | 158662 | 21727488 ~ 21727799 (-) |
| G685784 | NA | non-coding | upstream | 26229 | 21912964 ~ 21913189 (-) |
| G685762 | exoc8 | non-coding | upstream | 40312 | 21927047 ~ 21929631 (-) |
| G685868 | NA | non-coding | upstream | 161023 | 22047758 ~ 22048399 (-) |
| G685895 | NA | non-coding | upstream | 196177 | 22082912 ~ 22083121 (-) |
| G685903 | NA | non-coding | upstream | 203026 | 22089761 ~ 22090027 (-) |
| G684844 | NA | other | downstream | 407258 | 21478766 ~ 21479203 (-) |
| G681659 | NA | other | downstream | 3094324 | 18791230 ~ 18792137 (-) |
| G679471 | NA | other | downstream | 4771933 | 17113543 ~ 17114528 (-) |
| G679210 | LOC106571290 | other | downstream | 5256202 | 16625090 ~ 16630259 (-) |
| G679087 | NA | other | downstream | 5453447 | 16432621 ~ 16433014 (-) |
| G685953 | NA | other | upstream | 272295 | 22159030 ~ 22161042 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 1730172 | 23614938 ~ 23659111 (-) |
| G687890 | NA | other | upstream | 1748574 | 23635309 ~ 23637408 (-) |
| G687979 | LOC106571438 | other | upstream | 1868097 | 23754832 ~ 23756910 (-) |
