G685212



Basic Information


Item Value
gene id G685212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21913573 ~ 21913824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU780262
GCTTTATAACGATGGTTGACCGTTGCTCTCTGTCTGTGAGAAGATACAGTAACAGGGTAACTATCTGAGGGTCCACCAGTGTTGATCACATGACTTGTCTACGGAGCCTTGACCTGATAAGAAAACACTTACATAGCCATATTGTGCAATAGCTCTCTACTTCACCTAAACTGCAAATTCCAGAAGCTTTGCTTCTTAGTTTTCAGTATGAGATAATAACAATGTTACCTTCAGCTgtacatataaactcag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU780262 True 252 lncRNA 0.40 1 21913573 21913824

Neighbor


gene id symbol gene type direction distance location
LOC110529604 NA coding upstream 2144 21905011 ~ 21912494 (+)
LOC110529601 LOC106571541 coding upstream 33985 21876894 ~ 21879588 (+)
LOC110529600 LOC106571396 coding upstream 36829 21874399 ~ 21876744 (+)
LOC110529597 LOC106571394 coding upstream 96883 21789216 ~ 21816690 (+)
LOC110529596 LOC106571393 coding upstream 130859 21779870 ~ 21782714 (+)
LOC110529606 exoc8 coding downstream 13186 21927010 ~ 21929650 (+)
LOC110529607 LOC106571401 coding downstream 17218 21931042 ~ 21958665 (+)
gnpat LOC106571402 coding downstream 47177 21961001 ~ 21970793 (+)
LOC118965501 NA coding downstream 374462 22288286 ~ 22292263 (+)
LOC110529613 LOC106571406 coding downstream 404669 22318493 ~ 22403025 (+)
G685183 LOC106571395 non-coding upstream 48922 21864060 ~ 21864651 (+)
G685164 NA non-coding upstream 88288 21824969 ~ 21825285 (+)
G685163 NA non-coding upstream 88800 21824556 ~ 21824773 (+)
G685162 NA non-coding upstream 89806 21823562 ~ 21823767 (+)
G685215 NA non-coding downstream 12112 21925117 ~ 21926356 (+)
G685365 NA non-coding downstream 246799 22160623 ~ 22161261 (+)
G685415 NA non-coding downstream 318799 22232623 ~ 22232848 (+)
G685495 NA non-coding downstream 439708 22353532 ~ 22354430 (+)
LOC110529590 LOC106571388 other upstream 489009 21406192 ~ 21424564 (+)
G684314 NA other upstream 834702 21077070 ~ 21078871 (+)
G683845 NA other upstream 1206202 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 1280674 20626950 ~ 20632899 (+)
G683669 NA other upstream 1350139 20562875 ~ 20563434 (+)
G685311 NA other downstream 170050 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 509234 22419790 ~ 22433035 (+)
G685469 NA other downstream 532947 22446771 ~ 22448073 (+)
G685551 NA other downstream 566499 22480323 ~ 22482139 (+)

Expression



Co-expression Network