G685903



Basic Information


Item Value
gene id G685903
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22089761 ~ 22090027 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU781054
ttgtgttgtgtgacaaaactgcacattttagagtggccttttattgtccccagaacaaggtgcacctgtgtaatgatcattctgtttaatcagcttcttgacatgacACACCAttaaggtggatggattatcttagaaaaggagaaatgctcactaacagggatgtaaacaaatttgtgcacaatatttGAAAGGAACACGCTTTTGGTgtgtatagaacatttctgggatcttttatttcagctcatgaaacatgggaccaacact

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU781054 True 267 lncRNA 0.38 1 22089761 22090027

Neighbor


gene id symbol gene type direction distance location
c8h1orf131 cssa15h1orf131 coding downstream 128654 21958205 ~ 21961107 (-)
LOC110529207 sprtn coding downstream 163454 21920427 ~ 21926307 (-)
LOC110529605 LOC106571399 coding downstream 170972 21915516 ~ 21918789 (-)
ttc13 LOC106571397 coding downstream 184718 21887973 ~ 21905043 (-)
LOC110529599 LOC106571395 coding downstream 217299 21832528 ~ 21872462 (-)
LOC110529612 LOC106571405 coding upstream 220354 22310381 ~ 22315605 (-)
LOC110529614 LOC106571407 coding upstream 319977 22410004 ~ 22416404 (-)
LOC110529617 LOC106571409 coding upstream 356688 22446715 ~ 22459584 (-)
LOC110529618 LOC106571410 coding upstream 391753 22481780 ~ 22496418 (-)
txlnba LOC100194672 coding upstream 443129 22533156 ~ 22562329 (-)
G685895 NA non-coding downstream 6640 22082912 ~ 22083121 (-)
G685868 NA non-coding downstream 41362 22047758 ~ 22048399 (-)
G685762 exoc8 non-coding downstream 160130 21927047 ~ 21929631 (-)
G685784 NA non-coding downstream 176572 21912964 ~ 21913189 (-)
G685776 NA non-coding downstream 203026 21886461 ~ 21886735 (-)
G685911 NA non-coding upstream 11614 22101641 ~ 22101894 (-)
G685953 NA non-coding upstream 69003 22159030 ~ 22161042 (-)
G685973 NA non-coding upstream 103508 22193535 ~ 22194183 (-)
G686073 NA non-coding upstream 263573 22353600 ~ 22354283 (-)
G686090 LOC106571406 non-coding upstream 292087 22382114 ~ 22393749 (-)
G684844 NA other downstream 610558 21478766 ~ 21479203 (-)
G681659 NA other downstream 3297624 18791230 ~ 18792137 (-)
G679471 NA other downstream 4975233 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 5459502 16625090 ~ 16630259 (-)
LOC110529643 LOC106571435 other upstream 1526880 23614938 ~ 23659111 (-)
G687890 NA other upstream 1545282 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 1664805 23754832 ~ 23756910 (-)
G688109 NA other upstream 1898072 23988099 ~ 23988854 (-)

Expression



Co-expression Network