Gene
RNA
| Item | Value |
|---|---|
| gene id | G686090 |
| gene name | LOC106571406 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 22382114 ~ 22393749 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: scavenger receptor class A member 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU781260 | True | 327 | lncRNA | 0.53 | 2 | 22382114 | 22393749 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529612 | LOC106571405 | coding | downstream | 66509 | 22310381 ~ 22315605 (-) |
| LOC110529611 | LOC106571404 | coding | downstream | 93951 | 22007750 ~ 22288163 (-) |
| c8h1orf131 | cssa15h1orf131 | coding | downstream | 421007 | 21958205 ~ 21961107 (-) |
| LOC110529207 | sprtn | coding | downstream | 455807 | 21920427 ~ 21926307 (-) |
| LOC110529605 | LOC106571399 | coding | downstream | 463325 | 21915516 ~ 21918789 (-) |
| LOC110529614 | LOC106571407 | coding | upstream | 16255 | 22410004 ~ 22416404 (-) |
| LOC110529617 | LOC106571409 | coding | upstream | 52966 | 22446715 ~ 22459584 (-) |
| LOC110529618 | LOC106571410 | coding | upstream | 88031 | 22481780 ~ 22496418 (-) |
| txlnba | LOC100194672 | coding | upstream | 139407 | 22533156 ~ 22562329 (-) |
| cited2 | LOC106571411 | coding | upstream | 181371 | 22575120 ~ 22577512 (-) |
| G686073 | NA | non-coding | downstream | 27831 | 22353600 ~ 22354283 (-) |
| G685973 | NA | non-coding | downstream | 187931 | 22193535 ~ 22194183 (-) |
| G685953 | NA | non-coding | downstream | 221072 | 22159030 ~ 22161042 (-) |
| G685911 | NA | non-coding | downstream | 280220 | 22101641 ~ 22101894 (-) |
| G685903 | NA | non-coding | downstream | 292087 | 22089761 ~ 22090027 (-) |
| G686106 | topk | non-coding | upstream | 12516 | 22406265 ~ 22409834 (-) |
| G686138 | NA | non-coding | upstream | 105434 | 22499183 ~ 22499507 (-) |
| G686139 | NA | non-coding | upstream | 107484 | 22501233 ~ 22501469 (-) |
| G686143 | NA | non-coding | upstream | 110913 | 22504662 ~ 22504934 (-) |
| G686153 | NA | non-coding | upstream | 131111 | 22524860 ~ 22525069 (-) |
| G684844 | NA | other | downstream | 902911 | 21478766 ~ 21479203 (-) |
| G681659 | NA | other | downstream | 3589977 | 18791230 ~ 18792137 (-) |
| G679471 | NA | other | downstream | 5267586 | 17113543 ~ 17114528 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 1223158 | 23614938 ~ 23659111 (-) |
| G687890 | NA | other | upstream | 1241560 | 23635309 ~ 23637408 (-) |
| G687979 | LOC106571438 | other | upstream | 1361083 | 23754832 ~ 23756910 (-) |
| G688109 | NA | other | upstream | 1594350 | 23988099 ~ 23988854 (-) |
| G688366 | NA | other | upstream | 2031314 | 24425063 ~ 24425553 (-) |
