G685562


Basic Information

Item Value
gene id G685562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22465698 ~ 22465899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780657
tctgttacggtgcgtgaatgaggacccaaaagcgaattaacaaaacagagttactttaatgacgaaaacaaaacgtaggctcagacggacaggcagattccgacaggacaggacaaggttacagtaacacgacgatggtctggttcaggcatgaatgacacaaacaaacaaacaagaatccgacaaggacaggagcagaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780657 True 202 lncRNA 0.45 1 22465698 22465899

Neighbor

gene id symbol gene type direction distance location
LOC110529616 LOC106586086 coding upstream 40050 22419790 ~ 22433035 (+)
LOC110529615 topk coding upstream 55841 22406165 ~ 22409857 (+)
LOC110529613 LOC106571406 coding upstream 62673 22318493 ~ 22403025 (+)
LOC118965501 NA coding upstream 173435 22288286 ~ 22292263 (+)
gnpat LOC106571402 coding upstream 494905 21961001 ~ 21970793 (+)
LOC100136120 LOC100136120 coding downstream 8066 22473965 ~ 22478556 (+)
LOC118965502 NA coding downstream 30546 22496445 ~ 22498272 (+)
LOC110531077 NA coding downstream 37973 22503872 ~ 22506362 (+)
LOC110529619 hdc coding downstream 40945 22506844 ~ 22512029 (+)
gje1 LOC106571413 coding downstream 339005 22804904 ~ 22809549 (+)
G685539 NA non-coding upstream 24490 22440998 ~ 22441208 (+)
G685495 NA non-coding upstream 111268 22353532 ~ 22354430 (+)
G685415 NA non-coding upstream 232850 22232623 ~ 22232848 (+)
G685575 NA non-coding downstream 48162 22514061 ~ 22514365 (+)
G685610 LOC106571411 non-coding downstream 109221 22575120 ~ 22577488 (+)
G686253 NA non-coding downstream 219900 22685799 ~ 22686047 (+)
G686292 NA non-coding downstream 244844 22710743 ~ 22710956 (+)
G686296 NA non-coding downstream 247627 22713526 ~ 22713788 (+)
G685469 NA other upstream 17625 22446771 ~ 22448073 (+)
G685311 NA other upstream 381474 22083874 ~ 22084224 (+)
G685215 NA other upstream 539342 21925117 ~ 21926356 (+)
LOC110529590 LOC106571388 other upstream 1041134 21406192 ~ 21424564 (+)
G685551 NA other downstream 14424 22480323 ~ 22482139 (+)
G686448 LOC106571417 other downstream 480602 22946501 ~ 22972836 (+)
LOC110529640 LOC106571431 other downstream 1018533 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 1518546 23961761 ~ 23991295 (+)
G688613 NA other downstream 2516830 24982729 ~ 24984826 (+)

Expression


Co-expression Network