G685551


Basic Information

Item Value
gene id G685551
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22480323 ~ 22482139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU780646
GCAATTAAATAGAATATTTGCTGTTAGTCAGCAATTAATGCAAATGTACATATGAGATCAAAAGGTGTGTATCATATACAATATACAACATACCCCTTATACAGTACATCAACCTGAACAGCAGGGAAAAGAAGGCTCAACTTGGTTCAATACAGGGAGAATAGAATAAAGTGGAAACCTGAACGCCAGGAGTAAGGCTTTTGAAGACAGGTTAAGAAATTAAGAAAACACAAGAAGTTCCAGAAAAACAAAAAGACAGTTATACAAGGTGTAGATACCAACACAAATGTCAGACTAGGTAAGATACCGTATACAGGTAGAAATCAAGTGGTTTGTATTTAAGCACTGTCTTCATTCTAGATAAGAGCATGAACAACATGCGGGGGgtggacaaaaacaaaaaaacaggggAAAAGTGCAGTCGTTTCATTCTGGTCTCGCTTCCATAGTTGGTTATCATATCTCACAGGGAACCTTGTGTTTGGGGCAGGACTGATTCAATTTATGTACCGTAAGAGGCACAGGCAGCGTCAGCATGAGCAACTACAGAGCCAGGAGCAAAAACAAAAAGGTGGTCTGTCATCTGGGGGTCAATCACTTCACATAGTAACACAGCTCATTTTGTTACAGATTAAATTGCAGCAGACTAGtggaagaaaaaaatatacatacacaCTCATTTCATCATGCCGTTTATGTAACCATTGCGTGCCCAAATAAATCCaaacacacaccatacatacagCACACATGTATACAGAGACGCACATGGACAGAATAGCCCTCCGCGTAGCGGGATGCTGTAATAAACTGGAACATGAATTCATTCCTGTCACATGATCAGTCCAAAGCACTCCAGGATAGAGAGTCATCTCCTGTAGACTCCTCACAATGCCTTCACTGGCATGATTATCTGTCCTTGACAGGTCCCAGGAGACCAGGCCCACACACAGCACAGGCAGACCCCAGAGTGCTCCTCTACTGGACACTTGTCATCATGGGGAAGAATGAGGGAGGGAACTCAGCCTTCAATACCCCATGACTCAAGTTCCAGTTCAGTGCCTGTCAGTCTGGCCCCGGGGCCTGTGATATAGTATAAGGAATTGACGTCCAGAATAATCTTTGCTATTTCTTTGATAAATAAAAGTGCCAATATTTGTAACATTCCTATCCCAGCCCCTTTGGAAAGACTGTTCTGTCTGATGAGGGCGAGTCAGGGTGTGTTGTTGCAAACCGACCGTCAGTCCGACCGACAGGCGGTCaagtccgtcagtcagtcagaccgACCGACCGTCCGTCCGTCCGACAGACAGTCCGACAGACAGACCATCAGGCAGACCGTCCGACAGACAGACCATCAGGCAGACCATCAGGCAGACCGTCCGACAGACAGACAGACCATCAGGCAGACCATCAGGCAGACCGTCCGACAGACAGACGGTCGGTCAGTCCATCTGGTTCCCACAGAAGAGACAGCAGAATGCAGAGGGAATGGACAGCGGAGATAACATGTGCATCACACAAAAGGCCCCTTCAggtctctcctatcttctctcatGGACTtgtcctcctcacacacacaggttacaAATGGGAAAATGGTCTGAGCTGTTCCAGTTGAACCTCCAAAGATATCCTCTCTTCTAGTAAGTCCTATGAATTAAAAACAACAAGATAAACAATCCTCAAACGAGGACGAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU780646 True 1701 TUCP 0.45 2 22480323 22482139

Neighbor

gene id symbol gene type direction distance location
LOC100136120 LOC100136120 coding upstream 1767 22473965 ~ 22478556 (+)
LOC110529616 LOC106586086 coding upstream 54675 22419790 ~ 22433035 (+)
LOC110529615 topk coding upstream 70466 22406165 ~ 22409857 (+)
LOC110529613 LOC106571406 coding upstream 77298 22318493 ~ 22403025 (+)
LOC118965501 NA coding upstream 188060 22288286 ~ 22292263 (+)
LOC118965502 NA coding downstream 14306 22496445 ~ 22498272 (+)
LOC110531077 NA coding downstream 21733 22503872 ~ 22506362 (+)
LOC110529619 hdc coding downstream 24705 22506844 ~ 22512029 (+)
gje1 LOC106571413 coding downstream 322765 22804904 ~ 22809549 (+)
vta1 LOC106571414 coding downstream 327743 22809882 ~ 22857289 (+)
G685562 NA non-coding upstream 14424 22465698 ~ 22465899 (+)
G685539 NA non-coding upstream 39115 22440998 ~ 22441208 (+)
G685495 NA non-coding upstream 125893 22353532 ~ 22354430 (+)
G685575 NA non-coding downstream 31922 22514061 ~ 22514365 (+)
G685610 LOC106571411 non-coding downstream 92981 22575120 ~ 22577488 (+)
G686253 NA non-coding downstream 203660 22685799 ~ 22686047 (+)
G686292 NA non-coding downstream 228604 22710743 ~ 22710956 (+)
G686296 NA non-coding downstream 231387 22713526 ~ 22713788 (+)
G685469 NA other upstream 32250 22446771 ~ 22448073 (+)
G685311 NA other upstream 396099 22083874 ~ 22084224 (+)
G685215 NA other upstream 553967 21925117 ~ 21926356 (+)
LOC110529590 LOC106571388 other upstream 1055759 21406192 ~ 21424564 (+)
G686448 LOC106571417 other downstream 464362 22946501 ~ 22972836 (+)
LOC110529640 LOC106571431 other downstream 1002293 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 1502306 23961761 ~ 23991295 (+)
G688613 NA other downstream 2500590 24982729 ~ 24984826 (+)
G688823 NA other downstream 2576814 25058953 ~ 25061450 (+)

Expression


Co-expression Network