G686295



Basic Information


Item Value
gene id G686295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22713167 ~ 22713476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU781487
gttttaaatatccaataaatgtcgttccacttcatgattgtgtctcacttgttgttgattcttcacaaaaaaatacagttttacatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatctatctattttattttaaagtttctactccgctagccagcacctcgtcatACTAGGTGTGCGTTTATTTTTCTTCTAGAgcttgagatatctgccagggaCGCAGAGATGTGTTTCGCCACCTGGGTATTAAAATGggagaaggaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU781487 True 310 lncRNA 0.40 1 22713167 22713476

Neighbor


gene id symbol gene type direction distance location
cited2 LOC106571411 coding downstream 135655 22575120 ~ 22577512 (-)
txlnba LOC100194672 coding downstream 150838 22533156 ~ 22562329 (-)
LOC110529618 LOC106571410 coding downstream 216749 22481780 ~ 22496418 (-)
LOC110529617 LOC106571409 coding downstream 253583 22446715 ~ 22459584 (-)
LOC110529614 LOC106571407 coding downstream 296763 22410004 ~ 22416404 (-)
nmbr LOC106571412 coding upstream 76386 22789862 ~ 22803661 (-)
si:ch211-202p1.5 LOC106571542 coding upstream 216215 22929691 ~ 22950071 (-)
hivep2a LOC106571417 coding upstream 256613 22970089 ~ 23066952 (-)
adat2 adat2 coding upstream 432982 23146458 ~ 23151249 (-)
batf3 LOC106571544 coding upstream 479088 23192564 ~ 23198250 (-)
G686293 NA non-coding downstream 1143 22711758 ~ 22712024 (-)
G686277 NA non-coding downstream 13787 22699162 ~ 22699380 (-)
G686153 NA non-coding downstream 188098 22524860 ~ 22525069 (-)
G686143 NA non-coding downstream 208233 22504662 ~ 22504934 (-)
G686139 NA non-coding downstream 211698 22501233 ~ 22501469 (-)
G686297 NA non-coding upstream 159 22713635 ~ 22713904 (-)
G686314 NA non-coding upstream 13457 22726933 ~ 22727238 (-)
G686858 NA non-coding upstream 142413 22855889 ~ 22858714 (-)
G686891 LOC106607820 non-coding upstream 190946 22904422 ~ 22904940 (-)
G686899 NA non-coding upstream 199815 22913291 ~ 22915850 (-)
G685953 NA other downstream 552125 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 788259 21920427 ~ 21926307 (-)
G684844 NA other downstream 1233964 21478766 ~ 21479203 (-)
G681659 NA other downstream 3921030 18791230 ~ 18792137 (-)
G679471 NA other downstream 5598639 17113543 ~ 17114528 (-)
LOC110529643 LOC106571435 other upstream 903431 23614938 ~ 23659111 (-)
G687890 NA other upstream 921833 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 1041356 23754832 ~ 23756910 (-)
G688109 NA other upstream 1274623 23988099 ~ 23988854 (-)
G688366 NA other upstream 1711587 24425063 ~ 24425553 (-)

Expression



Co-expression Network