G686296


Basic Information

Item Value
gene id G686296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22713526 ~ 22713788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU781488
tatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcaagtGAGGTtgtatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctgtatatgtttatttttgaaccattccattgtaaatgttgctttatgttttggatcattgtcttgttggaagacaaatctccgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU781488 True 263 lncRNA 0.39 1 22713526 22713788

Neighbor

gene id symbol gene type direction distance location
LOC110529619 hdc coding upstream 201497 22506844 ~ 22512029 (+)
LOC110531077 NA coding upstream 207164 22503872 ~ 22506362 (+)
LOC118965502 NA coding upstream 215254 22496445 ~ 22498272 (+)
LOC100136120 LOC100136120 coding upstream 234970 22473965 ~ 22478556 (+)
LOC110529616 LOC106586086 coding upstream 287878 22419790 ~ 22433035 (+)
gje1 LOC106571413 coding downstream 91116 22804904 ~ 22809549 (+)
vta1 LOC106571414 coding downstream 96094 22809882 ~ 22857289 (+)
adgrg6 LOC106571415 coding downstream 146226 22860014 ~ 22915654 (+)
aig1 LOC106571419 coding downstream 362596 23076384 ~ 23144537 (+)
pex3 pex3 coding downstream 437493 23151281 ~ 23155668 (+)
G686292 NA non-coding upstream 2570 22710743 ~ 22710956 (+)
G686253 NA non-coding upstream 27479 22685799 ~ 22686047 (+)
G685610 LOC106571411 non-coding upstream 136038 22575120 ~ 22577488 (+)
G685575 NA non-coding upstream 199161 22514061 ~ 22514365 (+)
G685562 NA non-coding upstream 247627 22465698 ~ 22465899 (+)
G686298 NA non-coding downstream 732 22714520 ~ 22714864 (+)
G686308 NA non-coding downstream 8946 22722734 ~ 22723015 (+)
G686334 NA non-coding downstream 29067 22742855 ~ 22743056 (+)
G686378 NA non-coding downstream 84401 22798189 ~ 22799685 (+)
G686406 NA non-coding downstream 125768 22839556 ~ 22910729 (+)
G685551 NA other upstream 231387 22480323 ~ 22482139 (+)
G685469 NA other upstream 265453 22446771 ~ 22448073 (+)
G685311 NA other upstream 629302 22083874 ~ 22084224 (+)
G685215 NA other upstream 787170 21925117 ~ 21926356 (+)
G686448 LOC106571417 other downstream 232713 22946501 ~ 22972836 (+)
LOC110529640 LOC106571431 other downstream 770644 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 1270657 23961761 ~ 23991295 (+)
G688613 NA other downstream 2268941 24982729 ~ 24984826 (+)
G688823 NA other downstream 2345165 25058953 ~ 25061450 (+)

Expression


Co-expression Network