G686899


Basic Information

Item Value
gene id G686899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22913291 ~ 22915850 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782178
TTTCATTCCCTTTATTGGTGAGACACAACTCGTCAATGGAGAGGCAGCTTCATGAAAATACATTATTGTCAGGAGTTGTGGAAAAACAAATAACAGGgtctggattttttgttgttgaatagaACCAGATCAGCCACATTCATCAGAGTGATACGTCTAAGGTACAGTGTTGGTTTGGATGTAGCCATAGTGATTTTATAGCTCTGTGTCCCTAAATTAATAGAGACATGTACAACTGAATCAGAAACAAATCATGTCTGGATTCCCTCTGCATTGATAGAACTAGATaagatataacctagaggatcaTTTGGAATATTTTATGCAAATATCTATAAAGATGGCAGAGCAGTCGTTATCTAATTCATAGTAAAGCTGAGAACTCCGTCGTATTAGCTCAAACCACTTTATAATCCCTCCCCACACAATCTTGAATTGAAGACCCTAAATACGTTCAACACGAGATAACCTTTCCAAGCAAGGTTTCTATCATAACAAATTCGGCCCGAGGGAATTTGTTAGCGATGTTTCAATTATTTTCTTGATGCTGGAAAATAACAATTGAGAGCTCTGACTGCTTCCAAAATATAACTGGCCCTGTTCGCCTGCCCAGGTCAAGATCAATGCTTTGTTTTGCCACCAAGCTGCATCTCTCCAAATCTATCTATCCAAGATGAACAACAAATGTAAAAAGCTCTATAGAAATAAATATAACgatacagtaaaataacaagattGTTCCATCGcttcacaaacacaaaacaatagcTCACACAGCAACATTTAACACAATGCAATATATTCCGTTCCCCTATTGGTGGGAAAATAAGACTAAGTGAAGTAAAGCAACAACGAAGAGAAGATTAACATTTAGCTGCTTACAAATGTTGGCATTAACTTGGATGAACAAATAATGTCAGTGTTTGTAGTCCCTTTTCAATCAGTCCTGTATTATACGTTGTGCTGTGAGTTGCTCTATTGTGAAATTATTCAATGTGGAATGTTTATGAAACTATGAGCTGGATCCAATCCGTATTGCAGAAGATAAACGTTTTAGCGCAAGTAAAACATAAAGGAAATTTCCCAATGCACCAACATATGCTGTGTTTACATCTGTGAATGCCGAAACATTGCCTTGAAATTTCATTCGTGCTATAGTGCGGATCTcccgcgatacggattgaatctaggcctaccTTACCATATCCAGGTTTAATGGCTGGGGTTTGATAACCTCTATCCATAGAACAGTCAGAGAAATTACACTTGACACACAGATCACAGATCAAGTTACCAAAATGAAGTAGAAATTAATGGACCAATTCTATACATTCTTTCTGCATATGTTATTCAGTAGTAGAGCATCTGAAGCTTAATGTTTCAAAAATATACACGCCAAATCATCTCATcattgtgttgatgatgatgttgattgGTTGACCAAGATAAAGTAAGCACTTTATGCAAAACATCCTCATGTAAGACACTGTAAAGGAGCATAACATTGCTTTCCAGCAAAAAAAGCACACACAAGATTCACAAATAGACAACTGCAAATTAGAACTACACCTAAACTTGATCCATTTTCAACACACATTGACAATGCTGCAGCTTTTAAAAACTCCGTCATGTTAGTCTTTGGAtttgaaatataggcctatgcCTGAGCATTTAGTCCAGATTTGACCCTTTTCCTTCATTGCTGCCCATACTGGAGTTCTACAGACGGCATAATGAGAATGGAACAGCTAAACTGGATGACATTTCTGTACAGGAATGGTGACCCTGCTGAGAATCCTAGGCATGTGCAACACCAACTGAGAAGCAATTATACGGGGGCATATCAGATATACCATCAATATTTACACAACACATAGCCAGTTGAAGATTAGCATCACAGTATGTACATTGCAAACTCCATTCTCTGCTTCTCCCGTTTCTTTTCTATAGAACTATACATTTCCCCATTTCTCTTTTCAGTACTGACTGGACCAGCTGATTGAGTCAGAtattatacagtatacacatattcATACTACTAGCTACCGTCCTGCTGCTCTGGAGGCTATAACCCTGGGGTGACATTGTGGACTGGGGAGATCACCAAGGGTTAGGGgctagcagcagcaggaggaggaggaagaagagttgAAGTGCCGGGAGGTCTAGAACTTGGTGCTGTGGCTGAAGCTGTCCGACATGATAATGTTCTTGTAGAAGTTGTCGGAGCGCACCGAGCAGTAACCTTTGACCTTGTCAATGACCTGGTGCACGGggatgatggaggaggaggcCTCACCCTCCGAGGAGACAGTTTTAGCATTGGTCTGGTTG
>TU782179
CTAGAATATCAACCTCTTCCCAGCACATATGCACCCAACCACATATTGGATATTCTGAGTAAACCACATTGCGAAGACTTGGCAACTGTGCAGAGAAGAACAGTCAGTAAGTGTAAATTGAGAATGAATTAAACAGTCGTAACCGTTATGTCTTTCAGCAAACTCATCTGGTACATAGAACTTGACATGACACATATTAGGGTTATGATTAATAGAATTAGCTACTTTTCATTCCCTTTATTGGTGAGACACAACTCGTCAATGGAGAGGCAGCTTCATGAAAATACATTATTGTCAGGAGTTGTGGAAAAACAAATAACAGGgtctggattttttgttgttgaatagaACCAGATCAGCCACATTCATCAGAGTGATACGTCTAAGGTACAGTGTTGGTTTGGATGTAGCCATAGTGATTTTATAGCTCTGTGTCCCTAAATTAATAGAGACATGTACAACTGAATCAGAAACAAATCATGTCTGGATTCCCTCTGCATTGATAGAACTAGATaagatataacctagaggatcaTTTGGAATATTTTATGCAAATATCTATAAAGATGGCAGAGCAGTCGTTATCTAATTCATAGTAAAGCTGAGAACTCCGTCGTATTAGCTCAAACCACTTTATAATCCCTCCCCACACAATCTTGAATTGAAGACCCTAAATACGTTCAACACGAGATAACCTTTCCAAGCAAGGTTTCTATCATAACAAATTCGGCCCGAGGGAATTTGTTAGCGATGTTTCAATTATTTTCTTGATGCTGGAAAATAACAATTGAGAGCTCTGACTGCTTCCAAAATATAACTGGCCCTGTTCGCCTGCCCAGGTCAAGATCAATGCTTTGTTTTGCCACCAAGCTGCATCTCTCCAAATCTATCTATCCAAGATGAACAACAAATGTAAAAAGCTCTATAGAAATAAATATAACgatacagtaaaataacaagattGTTCCATCGcttcacaaacacaaaacaatagcTCACACAGCAACATTTAACACAATGCAATATATTCCGTTCCCCTATTGGTGGGAAAATAAGACTAAGTGAAGTAAAGCAACAACGAAGAGAAGATTAACATTTAGCTGCTTACAAATGTTGGCATTAACTTGGATGAACAAATAATGTCAGTGTTTGTAGTCCCTTTTCAATCAGTCCTGTATTATACGTTGTGCTGTGAGTTGCTCTATTGTGAAATTATTCAATGTGGAATGTTTATGAAACTATGAGCTGGATCCAATCCGTATTGCAGAAGATAAACGTTTTAGCGCAAGTAAAACATAAAGGAAATTTCCCAATGCACCAACATATGCTGTGTTTACATCTGTGAATGCCGAAACATTGCCTTGAAATTTCATTCGTGCTATAGTGCGGATCTcccgcgatacggattgaatctaggcctaccTTACCATATCCAGGTTTAATGGCTGGGGTTTGATAACCTCTATCCATAGAACAGTCAGAGAAATTACACTTGACACACAGATCACAGATCAAGTTACCAAAATGAAGTAGAAATTAATGGACCAATTCTATACATTCTTTCTGCATATGTTATTCAGTAGTAGAGCATCTGAAGCTTAATGTTTCAAAAATATACACGCCAAATCATCTCATcattgtgttgatgatgatgttgattgGTTGACCAAGATAAAGTAAGCACTTTATGCAAAACATCCTCATGTAAGACACTGTAAAGGAGCATAACATTGCTTTCCAGCAAAAAAAGCACACACAAGATTCACAAATAGACAACTGCAAATTAGAACTACACCTAAACTTGATCCATTTTCAACACACATTGACAATGCTGCAGCTTTTAAAAACTCCGTCATGTTAGTCTTTGGAtttgaaatataggcctatgcCTGAGCATTTAGTCCAGATTTGACCCTTTTCCTTCATTGCTGCCCATACTGGAGTTCTACAGACGGCATAATGAGAATGGAACAGCTAAACTGGATGACATTTCTGTACAGGAATGGTGACCCTGCTGAGAATCCTAGGCATGTGCAACACCAACTGAGAAGCAATTATACGGGGGCATATCAGATATACCATCAATATTTACACAACACATAGCCAGTTGAAGATTAGCATCACAGTATGTACATTGCAAACTCCATTCTCTGCTTCTCCCGTTTCTTTTCTATAGAACTATACATTTCCCCATTTCTCTTTTCAGTACTGACTGGACCAGCTGATTGAGTCAGAtattatacagtatacacatattcATACTACTAGCTACCGTCCTGCTGCTCTGGAGGCTATAACCCTGGGGTGACATTGTGGACTGGGGAGATCACCAAGGGTTAGGGgctagcagcagcaggaggaggaggaagaagagttgAAGTGCCGGGAGGTCTAGAACTTGGTGCTGTGGCTGAAGCTGTCCGACATGATAATGTTCTTGTAGAAGTTGTCGGAGCGCACCGAGCAGTAACCTTTGACCTTGTCAATGACCTGGTGCACGGggatgatggaggaggaggcCTCACCCTCCGAGGAGACAGTTTTAGCATTGGTCTGGTTG

Function

NR:

description
adhesion G-protein coupled receptor G6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782178 False 2334 lncRNA 0.40 1 22913291 22915624
TU782179 True 2560 lncRNA 0.39 1 22913291 22915850

Neighbor

gene id symbol gene type direction distance location
nmbr LOC106571412 coding downstream 109630 22789862 ~ 22803661 (-)
cited2 LOC106571411 coding downstream 335779 22575120 ~ 22577512 (-)
txlnba LOC100194672 coding downstream 350962 22533156 ~ 22562329 (-)
LOC110529618 LOC106571410 coding downstream 416873 22481780 ~ 22496418 (-)
LOC110529617 LOC106571409 coding downstream 453707 22446715 ~ 22459584 (-)
si:ch211-202p1.5 LOC106571542 coding upstream 13841 22929691 ~ 22950071 (-)
hivep2a LOC106571417 coding upstream 54239 22970089 ~ 23066952 (-)
adat2 adat2 coding upstream 230608 23146458 ~ 23151249 (-)
batf3 LOC106571544 coding upstream 276714 23192564 ~ 23198250 (-)
nsl1 nsl1 coding upstream 283661 23199511 ~ 23202233 (-)
G686891 LOC106607820 non-coding downstream 8351 22904422 ~ 22904940 (-)
G686858 NA non-coding downstream 54577 22855889 ~ 22858714 (-)
G686314 NA non-coding downstream 186053 22726933 ~ 22727238 (-)
G686297 NA non-coding downstream 199387 22713635 ~ 22713904 (-)
G686295 NA non-coding downstream 199815 22713167 ~ 22713476 (-)
G686912 NA non-coding upstream 23620 22939470 ~ 22939761 (-)
G686913 NA non-coding upstream 24180 22940030 ~ 22940483 (-)
G686943 NA non-coding upstream 89667 23005517 ~ 23010567 (-)
G686951 NA non-coding upstream 112390 23028240 ~ 23029506 (-)
G685953 NA other downstream 752249 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 988383 21920427 ~ 21926307 (-)
G684844 NA other downstream 1434088 21478766 ~ 21479203 (-)
G681659 NA other downstream 4121154 18791230 ~ 18792137 (-)
G679471 NA other downstream 5798763 17113543 ~ 17114528 (-)
LOC110529643 LOC106571435 other upstream 701057 23614938 ~ 23659111 (-)
G687890 NA other upstream 719459 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 838982 23754832 ~ 23756910 (-)
G688109 NA other upstream 1072249 23988099 ~ 23988854 (-)
G688366 NA other upstream 1509213 24425063 ~ 24425553 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017514 adgrg6 coding NC_007131.7 CM002904.2 37383034 ~ 37469640 (+)