G686447


Basic Information

Item Value
gene id G686447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 22943126 ~ 22943454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU781660
atctctctgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctctctgtctatagcccatctcactgtctatagcccatctctctgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctctctgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctcactgtctatagcccatctctctgtctatagcccatctctctgtctatagcccatctcactgtctatagcccatctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU781660 True 329 lncRNA 0.47 1 22943126 22943454

Neighbor

gene id symbol gene type direction distance location
adgrg6 LOC106571415 coding upstream 27472 22860014 ~ 22915654 (+)
vta1 LOC106571414 coding upstream 85837 22809882 ~ 22857289 (+)
gje1 LOC106571413 coding upstream 133577 22804904 ~ 22809549 (+)
LOC110529619 hdc coding upstream 431097 22506844 ~ 22512029 (+)
LOC110531077 NA coding upstream 436764 22503872 ~ 22506362 (+)
aig1 LOC106571419 coding downstream 132930 23076384 ~ 23144537 (+)
pex3 pex3 coding downstream 207827 23151281 ~ 23155668 (+)
atf3 atf3 coding downstream 234184 23177638 ~ 23181382 (+)
tatdn3 tatdn3 coding downstream 258790 23202244 ~ 23208093 (+)
flvcr1 flvcr1 coding downstream 265774 23209228 ~ 23220811 (+)
G686446 NA non-coding upstream 2616 22940250 ~ 22940510 (+)
G686444 NA non-coding upstream 5754 22937172 ~ 22937372 (+)
G686438 NA non-coding upstream 11866 22930753 ~ 22931260 (+)
G686432 NA non-coding upstream 19606 22923280 ~ 22923520 (+)
G686448 LOC106571417 non-coding downstream 6728 22946501 ~ 22972836 (+)
G686555 NA non-coding downstream 203036 23146490 ~ 23147721 (+)
G686556 NA non-coding downstream 216452 23159906 ~ 23160262 (+)
G686557 NA non-coding downstream 217859 23161313 ~ 23161518 (+)
G686558 NA non-coding downstream 218110 23161564 ~ 23162164 (+)
G685551 NA other upstream 460987 22480323 ~ 22482139 (+)
G685469 NA other upstream 495053 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 510091 22419790 ~ 22433035 (+)
G685311 NA other upstream 858902 22083874 ~ 22084224 (+)
G685215 NA other upstream 1016770 21925117 ~ 21926356 (+)
LOC110529640 LOC106571431 other downstream 540978 23484408 ~ 23524035 (+)
LOC110529210 ift172 other downstream 1040991 23961761 ~ 23991295 (+)
G688613 NA other downstream 2039275 24982729 ~ 24984826 (+)
G688823 NA other downstream 2115499 25058953 ~ 25061450 (+)

Expression


Co-expression Network