G687007



Basic Information


Item Value
gene id G687007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23142386 ~ 23144425 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU782295
AGCGGCGCTGCCAGTCTGGCTGTCCCAGAAAATAACATTCTGTGGTACAGCTGTTAGACAATACACATCCAAGAAAAGGCGATCATTCATGCCCCTGTAGGAGATGCCCTCGCTGGAAAGCACTCCAGTCAAAAGAAAAAAGAGAAGAGAATTTGAATACATGGCTTTTGCTAACTCTGCTGGCGTGCCTAAGCATCTTAAGATTAATATCATACCGTAGCAGTTAGTTCATTCCACTAATACACTATACTCTGTGTTCAGATAATAACTTGAGCCTTTGAGGTGGATGAACAGGATGATTCAATATTAATAAGTGGGTAAATGTAATGTCATCGTCATACCTCCAGTGAATAGAAAGGTGGAGAATTCATATCCCACCTTGTCATCGACGGAAAACAGGCATCTCAGTTCTTAGCTACAGTCTCAACAATTTTAGGGGGAGGACTCCGAACACAGCTTTAAAAACCAACATAATATTCCCACGTATTTCTCCATCATTTATTTACACAGTGGTTGTTATTCTGCAGTCCGGGTCGGGATTGGGCCTGTCTTTGCGGCAGCCCAGTGAGGACTGGGTCTTGACTTGATGGCAAGGTTCCCACACGTGTTGGCCTTCAGTCGGATTTAGCCTTGTCTGTGTCTAGAACACCTGGAAGACATTTGGAGCCGTCCCAGATGTAGCTGTTGAGGATCTCTCCCAGGACGTAGTAGATGTTAATCAGGACAGTGAGGCAGAAGAAGAAGGCCACCTTCGCCAGGGGACTGATCTGCTCCAACAGGGGGTAGACCCACACGCCGGTCACATGGTTCACCCAA

Function


NR:

description
androgen-induced gene 1 protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU782295 True 816 lncRNA 0.46 2 23142386 23144425

Neighbor


gene id symbol gene type direction distance location
hivep2a LOC106571417 coding downstream 75434 22970089 ~ 23066952 (-)
si:ch211-202p1.5 LOC106571542 coding downstream 192315 22929691 ~ 22950071 (-)
nmbr LOC106571412 coding downstream 338725 22789862 ~ 22803661 (-)
cited2 LOC106571411 coding downstream 564874 22575120 ~ 22577512 (-)
txlnba LOC100194672 coding downstream 580057 22533156 ~ 22562329 (-)
adat2 adat2 coding upstream 2033 23146458 ~ 23151249 (-)
batf3 LOC106571544 coding upstream 48139 23192564 ~ 23198250 (-)
nsl1 nsl1 coding upstream 55086 23199511 ~ 23202233 (-)
angel2 angel2 coding upstream 109162 23253587 ~ 23259122 (-)
galnt14 LOC106571428 coding upstream 115763 23260188 ~ 23365791 (-)
G686951 NA non-coding downstream 112880 23028240 ~ 23029506 (-)
G686943 NA non-coding downstream 131819 23005517 ~ 23010567 (-)
G686913 NA non-coding downstream 201903 22940030 ~ 22940483 (-)
G686912 NA non-coding downstream 202625 22939470 ~ 22939761 (-)
G687016 NA non-coding upstream 12464 23156889 ~ 23157099 (-)
G687017 NA non-coding upstream 12773 23157198 ~ 23157609 (-)
G687031 NA non-coding upstream 20345 23164770 ~ 23165125 (-)
G687034 NA non-coding upstream 29546 23173971 ~ 23174316 (-)
G687041 NA non-coding upstream 41733 23186158 ~ 23186391 (-)
G685953 NA other downstream 981344 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1217478 21920427 ~ 21926307 (-)
G684844 NA other downstream 1663183 21478766 ~ 21479203 (-)
G681659 NA other downstream 4350249 18791230 ~ 18792137 (-)
G679471 NA other downstream 6027858 17113543 ~ 17114528 (-)
LOC110529643 LOC106571435 other upstream 472482 23614938 ~ 23659111 (-)
G687890 NA other upstream 490884 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 610407 23754832 ~ 23756910 (-)
G688109 NA other upstream 843674 23988099 ~ 23988854 (-)
G688366 NA other upstream 1280638 24425063 ~ 24425553 (-)

Expression



Co-expression Network