G687017



Basic Information


Item Value
gene id G687017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23157198 ~ 23157609 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU782312
ttgtctggaagcaagacgtcgatgtccacgacagggctggttttcttttagTAATCCgtaattgtctgtagaccctgccacaaagGTCTTGTGTTTgggccattgaattgcgactccactttgtctctttactgacactttgcttgtttaaTTGCTTTACGGAGGgattaactacactgtttgtattcggccatgtttccagtcgccttgccatgattaaatgcggtggtacgtgctttcagttttgcgcgaattctgacatcaatccacggttttaggttagggaaggttttaatagtcacagtgggtacaatatctcctatacacttccttctaaactcgctcaccgagtcagcgtatacgtcaatgttattgtctgaggctacccggaacatatcccagtccacgtgat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU782312 True 412 lncRNA 0.45 1 23157198 23157609

Neighbor


gene id symbol gene type direction distance location
adat2 adat2 coding downstream 5949 23146458 ~ 23151249 (-)
hivep2a LOC106571417 coding downstream 90246 22970089 ~ 23066952 (-)
si:ch211-202p1.5 LOC106571542 coding downstream 207127 22929691 ~ 22950071 (-)
nmbr LOC106571412 coding downstream 353537 22789862 ~ 22803661 (-)
cited2 LOC106571411 coding downstream 579686 22575120 ~ 22577512 (-)
batf3 LOC106571544 coding upstream 34955 23192564 ~ 23198250 (-)
nsl1 nsl1 coding upstream 41902 23199511 ~ 23202233 (-)
angel2 angel2 coding upstream 95978 23253587 ~ 23259122 (-)
galnt14 LOC106571428 coding upstream 102579 23260188 ~ 23365791 (-)
LOC110529641 LOC106571433 coding upstream 370021 23527630 ~ 23582982 (-)
G687016 NA non-coding downstream 99 23156889 ~ 23157099 (-)
G687007 NA non-coding downstream 12773 23142386 ~ 23144425 (-)
G686951 NA non-coding downstream 127692 23028240 ~ 23029506 (-)
G686943 NA non-coding downstream 146631 23005517 ~ 23010567 (-)
G686913 NA non-coding downstream 216715 22940030 ~ 22940483 (-)
G687031 NA non-coding upstream 7161 23164770 ~ 23165125 (-)
G687034 NA non-coding upstream 16362 23173971 ~ 23174316 (-)
G687041 NA non-coding upstream 28549 23186158 ~ 23186391 (-)
G687044 NA non-coding upstream 31406 23189015 ~ 23189218 (-)
G687024 NA non-coding upstream 50263 23207872 ~ 23208815 (-)
G685953 NA other downstream 996156 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1232290 21920427 ~ 21926307 (-)
G684844 NA other downstream 1677995 21478766 ~ 21479203 (-)
G681659 NA other downstream 4365061 18791230 ~ 18792137 (-)
G679471 NA other downstream 6042670 17113543 ~ 17114528 (-)
LOC110529643 LOC106571435 other upstream 459298 23614938 ~ 23659111 (-)
G687890 NA other upstream 477700 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 597223 23754832 ~ 23756910 (-)
G688109 NA other upstream 830490 23988099 ~ 23988854 (-)
G688366 NA other upstream 1267454 24425063 ~ 24425553 (-)

Expression



Co-expression Network