G686675


Basic Information

Item Value
gene id G686675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23356563 ~ 23420985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU781934
ataaatacagtgccttgcgaaagtattcggcccccttgaactttgtgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttccgtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU781934 True 373 lncRNA 0.38 2 23356563 23420985

Neighbor

gene id symbol gene type direction distance location
vash2 vash2 coding upstream 106777 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 135752 23209228 ~ 23220811 (+)
tatdn3 tatdn3 coding upstream 148470 23202244 ~ 23208093 (+)
atf3 atf3 coding upstream 175181 23177638 ~ 23181382 (+)
pex3 pex3 coding upstream 200895 23151281 ~ 23155668 (+)
LOC110529640 LOC106571431 coding downstream 63423 23484408 ~ 23524035 (+)
LOC110529642 LOC106571434 coding downstream 164735 23585720 ~ 23614904 (+)
znf512 LOC106571438 coding downstream 326411 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 408773 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 426204 23847189 ~ 23872593 (+)
G686602 NA non-coding upstream 102243 23252209 ~ 23254320 (+)
G686569 NA non-coding upstream 165516 23190807 ~ 23191047 (+)
G686568 NA non-coding upstream 166446 23189915 ~ 23190117 (+)
G686560 NA non-coding upstream 188915 23166086 ~ 23167648 (+)
G686724 NA non-coding downstream 20033 23441018 ~ 23441270 (+)
G686730 NA non-coding downstream 25329 23446314 ~ 23446647 (+)
G686731 NA non-coding downstream 26130 23447115 ~ 23447417 (+)
G686733 NA non-coding downstream 27852 23448837 ~ 23449117 (+)
G686740 NA non-coding downstream 29986 23450971 ~ 23451195 (+)
G686448 LOC106571417 other upstream 383727 22946501 ~ 22972836 (+)
G685551 NA other upstream 874424 22480323 ~ 22482139 (+)
G685469 NA other upstream 908490 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 923528 22419790 ~ 22433035 (+)
G685311 NA other upstream 1272339 22083874 ~ 22084224 (+)
LOC110529210 ift172 other downstream 563460 23961761 ~ 23991295 (+)
G688613 NA other downstream 1561744 24982729 ~ 24984826 (+)
G688823 NA other downstream 1637968 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2257667 25678604 ~ 25685894 (+)

Expression


Co-expression Network