G686708


Basic Information

Item Value
gene id G686708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23410439 ~ 23415293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU781968
gttacggtgagtgaatgaggacccaaaagcgaactaacttaaacagagcttctttaataaccaaacataggtaggctcagatagaccgacagattccgacaggacaggacaaggttacagcaaacatgacgatagtctggctcaggcatgaaacacaacaaacaagaatccgacaaggacaggaacaaaaacagagagagatataggggactaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU781968 True 216 lncRNA 0.44 2 23410439 23415293

Neighbor

gene id symbol gene type direction distance location
LOC110529639 LOC106571429 coding upstream 4916 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 160653 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 189628 23209228 ~ 23220811 (+)
tatdn3 tatdn3 coding upstream 202346 23202244 ~ 23208093 (+)
atf3 atf3 coding upstream 229057 23177638 ~ 23181382 (+)
LOC110529640 LOC106571431 coding downstream 69115 23484408 ~ 23524035 (+)
LOC110529642 LOC106571434 coding downstream 170427 23585720 ~ 23614904 (+)
znf512 LOC106571438 coding downstream 332103 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 414465 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 431896 23847189 ~ 23872593 (+)
G686602 NA non-coding upstream 156119 23252209 ~ 23254320 (+)
G686569 NA non-coding upstream 219392 23190807 ~ 23191047 (+)
G686568 NA non-coding upstream 220322 23189915 ~ 23190117 (+)
G686560 NA non-coding upstream 242791 23166086 ~ 23167648 (+)
G686724 NA non-coding downstream 25725 23441018 ~ 23441270 (+)
G686730 NA non-coding downstream 31021 23446314 ~ 23446647 (+)
G686731 NA non-coding downstream 31822 23447115 ~ 23447417 (+)
G686733 NA non-coding downstream 33544 23448837 ~ 23449117 (+)
G686740 NA non-coding downstream 35678 23450971 ~ 23451195 (+)
G686448 LOC106571417 other upstream 437603 22946501 ~ 22972836 (+)
G685551 NA other upstream 928300 22480323 ~ 22482139 (+)
G685469 NA other upstream 962366 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 977404 22419790 ~ 22433035 (+)
G685311 NA other upstream 1326215 22083874 ~ 22084224 (+)
LOC110529210 ift172 other downstream 569152 23961761 ~ 23991295 (+)
G688613 NA other downstream 1567436 24982729 ~ 24984826 (+)
G688823 NA other downstream 1643660 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2263359 25678604 ~ 25685894 (+)

Expression


Co-expression Network