G686740


Basic Information

Item Value
gene id G686740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23450971 ~ 23451195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782001
ccaccatgcttcaccgtagggttgataccaggtttcctgcagacatgacgcttggcattcagatcagagaatcttgtttatcatggtctgagtgtctttaggtgccttttggcaaactccaagtgggctgtcatgtgccttttaatgaggagtggcttccgtctggccaccctatcataaaggcctgtttgGAAGAGTTCtacagagatagttgtccttctggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782001 True 225 lncRNA 0.48 1 23450971 23451195

Neighbor

gene id symbol gene type direction distance location
LOC110529639 LOC106571429 coding upstream 45448 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 201185 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 230160 23209228 ~ 23220811 (+)
tatdn3 tatdn3 coding upstream 242878 23202244 ~ 23208093 (+)
atf3 atf3 coding upstream 269589 23177638 ~ 23181382 (+)
LOC110529640 LOC106571431 coding downstream 33213 23484408 ~ 23524035 (+)
LOC110529642 LOC106571434 coding downstream 134525 23585720 ~ 23614904 (+)
znf512 LOC106571438 coding downstream 296201 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 378563 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 395994 23847189 ~ 23872593 (+)
G686733 NA non-coding upstream 1854 23448837 ~ 23449117 (+)
G686731 NA non-coding upstream 3554 23447115 ~ 23447417 (+)
G686730 NA non-coding upstream 4324 23446314 ~ 23446647 (+)
G686724 NA non-coding upstream 9701 23441018 ~ 23441270 (+)
G686675 NA non-coding upstream 29986 23356563 ~ 23420985 (+)
G686741 NA non-coding downstream 155 23451350 ~ 23451597 (+)
G686744 NA non-coding downstream 4732 23455927 ~ 23456143 (+)
G686735 NA non-coding downstream 57171 23508366 ~ 23522633 (+)
G687224 NA non-coding downstream 76521 23527716 ~ 23529885 (+)
G687225 LOC106571433 non-coding downstream 82124 23533319 ~ 23546534 (+)
G686448 LOC106571417 other upstream 478135 22946501 ~ 22972836 (+)
G685551 NA other upstream 968832 22480323 ~ 22482139 (+)
G685469 NA other upstream 1002898 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1017936 22419790 ~ 22433035 (+)
G685311 NA other upstream 1366747 22083874 ~ 22084224 (+)
LOC110529210 ift172 other downstream 533250 23961761 ~ 23991295 (+)
G688613 NA other downstream 1531534 24982729 ~ 24984826 (+)
G688823 NA other downstream 1607758 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2227457 25678604 ~ 25685894 (+)

Expression


Co-expression Network