G686735


Basic Information

Item Value
gene id G686735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23508366 ~ 23522633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU781996
aattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcaggaagaacaaggaacacaccaggaaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttccctagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU781996 True 409 lncRNA 0.43 2 23508366 23522633

Neighbor

gene id symbol gene type direction distance location
LOC110529639 LOC106571429 coding upstream 102843 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 258580 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 287555 23209228 ~ 23220811 (+)
tatdn3 tatdn3 coding upstream 300273 23202244 ~ 23208093 (+)
atf3 atf3 coding upstream 326984 23177638 ~ 23181382 (+)
LOC110529642 LOC106571434 coding downstream 63087 23585720 ~ 23614904 (+)
znf512 LOC106571438 coding downstream 224763 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 307125 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 324556 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 357103 23879736 ~ 23882523 (+)
G686744 NA non-coding upstream 52223 23455927 ~ 23456143 (+)
G686741 NA non-coding upstream 56769 23451350 ~ 23451597 (+)
G686740 NA non-coding upstream 57171 23450971 ~ 23451195 (+)
G686733 NA non-coding upstream 59249 23448837 ~ 23449117 (+)
G686731 NA non-coding upstream 60949 23447115 ~ 23447417 (+)
G687224 NA non-coding downstream 5083 23527716 ~ 23529885 (+)
G687225 LOC106571433 non-coding downstream 10686 23533319 ~ 23546534 (+)
G687234 NA non-coding downstream 24906 23547539 ~ 23547741 (+)
G687235 NA non-coding downstream 26197 23548830 ~ 23549094 (+)
G687236 NA non-coding downstream 26669 23549302 ~ 23549519 (+)
G686448 LOC106571417 other upstream 535530 22946501 ~ 22972836 (+)
G685551 NA other upstream 1026227 22480323 ~ 22482139 (+)
G685469 NA other upstream 1060293 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1075331 22419790 ~ 22433035 (+)
G685311 NA other upstream 1424142 22083874 ~ 22084224 (+)
LOC110529210 ift172 other downstream 461812 23961761 ~ 23991295 (+)
G688613 NA other downstream 1460096 24982729 ~ 24984826 (+)
G688823 NA other downstream 1536320 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2156019 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2610558 26133191 ~ 26195544 (+)

Expression


Co-expression Network