G687210


Basic Information

Item Value
gene id G687210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23520461 ~ 23524038 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782527
TTGAGCGTGTCACTTATATTTGATATTCTGTACACCAATGTGATATTACAGCTATTTGTTACAATCATCTTATTTATTCTGTAAAATAATTGAACAGTTAGAAGTGGTCTTTAAATTTCACAGATACATTGAATATCTCCTTTTGTGAAAGTAGTTTCAGTCTCCAATGAGGATTTTATATTCTTCACAATTCATGGCATTCAAGTGCAGGGATCATGAAATGTGACATATCAATGCTTGGAGCTAAATCTTTTTCTTTGTACTTTTGTTATCCGTAATACTGAAATAAACTTATCACACACTCTACTTCAAACACAAGCCACTGACAAATGCTTCCATTCTTGAATCTTGACAAAGTACAAGATTAAactgcataacttaaAGTATCCATCTGAACAAAATATGATATCTGGCAGACTGCTAGCTACATTCCTCTGACACTTTTTGTCTCCTGTCAGCTCTCGCCTGGTTCTATTTAAGGGAATTGACTGTAACAAACGGGTTTAAAAAATAGATGTCTTCAAAACACAATCAAAGCGTATGCTACCATCTATGTTTTTCCACTTTCCTATTATTTCTAGCTTAAAAATACCACTATTTAAATGGATCATACAGCACAACTGGTCGCTGTAGTTGTGTCCCACTCTTCTCCTGCCATTTGCAGGAGGCAAAAATAACCAATTACATTCATTTTAGTTCcatgtgtacacacagacacttaaTTAAATGGACAGTATCTATGGCAACTGGCCCAGAATGATTCACTGAACAATACACTGACAatgaacaacaaaaacaacaaccatTAAATAGTAGTACAAAAGTCACAGAAGgctataaatgtgtgtgtgtgtgatgtgagtaGTCTTTATATACGATAGACATATCTGAAAAACGACACAAAGGTATCCATGCAGAATattactgtatataaaaaaagtGCATCTCCATATGCCATAagttttaaaggcccagtgcagtcaaacatGAGATttgtctgtgttttatatatatttccactctatgaggttggaataatactgtgaattcGTAagaattatgataatgcccttatagtgtaagagctgtttgaaatggctgcctgaaatttcagcctgttttggtgggatggagtgttgtccttccatggtgacatcaccaggcgttaaaatagttaatagaccaataagaaagagagttccaaacctctctgccaataacagctaattttcagttttcccctccctactcaaaccactcccagacagtcctagtggAATTCTTGCTTGAGTAATTGCCCTTTGCTAAGAAGccctttttgtttatttttgaccattttaatggaaaactattacagtaaggtacttaattgttaccaaaAAATgattgatattgagataaaaacggcggCATTGGACCATTAACAACATCACATACTATACAATCCTGGCGGACTTGACAGGCACTGATACCATCTTCAGTCTACTAGTCATAATAAGAGTGTGGTTGAACAGCTGATAACATACACAGAGGAATAAACTGcacatttcatttttttcatAAAGACCCCTGAACAACTGAATTAGTGCCCCAGACAGGATGGATAGTCCTTAGCACACGGTATAGTATTGTACATACAGTTGGCACATATTCATAATTCATTCTGTTATTTTCTTCACAGGACACTTTGGGCACATGTAGAAAACACCTCTCCATCAATGTTGACGTGCTCCTCATTCTACCACTGAGCTGTGAAGTGGAGCTGCagctgcagcagtagcagtaagCGATATGGTACAGTAGGTAGGGTGGGGTTAAGCCTGTGAATATCATCCTGCCTTGGCTCTCCCCTAGGGGGATGTTGCGATAGGAGACAACTGTACATCAAGGCTTCACGTTGAGCTGGGCTGGGCCAACCTTAAACCTGCTGGGGAACCCTCTGATCCCTAtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782527 True 1952 lncRNA 0.38 2 23520461 23524038

Neighbor

gene id symbol gene type direction distance location
galnt14 LOC106571428 coding downstream 154670 23260188 ~ 23365791 (-)
angel2 angel2 coding downstream 261339 23253587 ~ 23259122 (-)
nsl1 nsl1 coding downstream 318228 23199511 ~ 23202233 (-)
batf3 LOC106571544 coding downstream 322211 23192564 ~ 23198250 (-)
adat2 adat2 coding downstream 369212 23146458 ~ 23151249 (-)
LOC110529641 LOC106571433 coding upstream 3592 23527630 ~ 23582982 (-)
LOC110529643 LOC106571435 coding upstream 90900 23614938 ~ 23659111 (-)
LOC110529644 NA coding upstream 154793 23678831 ~ 23682862 (-)
LOC110529645 NA coding upstream 170423 23694461 ~ 23732156 (-)
LOC110531080 LOC106571440 coding upstream 267961 23791999 ~ 23805391 (-)
G687197 NA non-coding downstream 38182 23481956 ~ 23482279 (-)
G687184 NA non-coding downstream 56706 23463545 ~ 23463755 (-)
G687174 NA non-coding downstream 69530 23450581 ~ 23450931 (-)
G687155 NA non-coding downstream 98282 23421666 ~ 23422179 (-)
G687135 LOC106571429 non-coding downstream 114938 23403301 ~ 23405523 (-)
G687872 NA non-coding upstream 7717 23531755 ~ 23532405 (-)
G687873 NA non-coding upstream 8482 23532520 ~ 23532839 (-)
G687902 NA non-coding upstream 50419 23574457 ~ 23574687 (-)
G687920 NA non-coding upstream 98341 23622379 ~ 23622645 (-)
G685953 NA other downstream 1359419 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1595553 21920427 ~ 21926307 (-)
G684844 NA other downstream 2041258 21478766 ~ 21479203 (-)
G681659 NA other downstream 4728324 18791230 ~ 18792137 (-)
G679471 NA other downstream 6405933 17113543 ~ 17114528 (-)
G687890 NA other upstream 111271 23635309 ~ 23637408 (-)
G687979 LOC106571438 other upstream 230794 23754832 ~ 23756910 (-)
G688109 NA other upstream 464061 23988099 ~ 23988854 (-)
G688366 NA other upstream 901025 24425063 ~ 24425553 (-)

Expression


Co-expression Network