G687237


Basic Information

Item Value
gene id G687237
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23549931 ~ 23550413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782555
gggcattcaaatcctcaaaacgttctacagctgcaccattgagagcatcttgactggctgcatcaccacttggtatggcaactgcttggcatccgaccgcaaggcgctacagagggtagtgcatttggcccagttcatcactggggctgagctccttgccatccaggacctccgtaccaggcggtgtcagaggaaggccctaaaaattgtgaaagactccagccacccaagtcatagattgttctctcagctaccgcatggcaagcggcaagtctggaaccaacaggactctgaacagcttctacccccaagcaataagactgctaaacagtttaaatagttaaccaaatagctacccggactatctgcgtTGACCCTTTTCGCACtaacttttttgactcatcacataagctgctgctactgtttactatctgtcactttattctacctcaattacctcgtacccctgcacatcaagtCAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782555 True 483 lncRNA 0.49 1 23549931 23550413

Neighbor

gene id symbol gene type direction distance location
LOC110529640 LOC106571431 coding upstream 28673 23484408 ~ 23524035 (+)
LOC110529639 LOC106571429 coding upstream 144408 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 300145 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 329120 23209228 ~ 23220811 (+)
tatdn3 tatdn3 coding upstream 341838 23202244 ~ 23208093 (+)
LOC110529642 LOC106571434 coding downstream 35307 23585720 ~ 23614904 (+)
znf512 LOC106571438 coding downstream 196983 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 279345 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 296776 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 329323 23879736 ~ 23882523 (+)
G687236 NA non-coding upstream 412 23549302 ~ 23549519 (+)
G687235 NA non-coding upstream 837 23548830 ~ 23549094 (+)
G687234 NA non-coding upstream 2190 23547539 ~ 23547741 (+)
G687225 LOC106571433 non-coding upstream 3397 23533319 ~ 23546534 (+)
G687224 NA non-coding upstream 20046 23527716 ~ 23529885 (+)
G687252 NA non-coding downstream 15717 23566130 ~ 23566364 (+)
G687256 NA non-coding downstream 19227 23569640 ~ 23569934 (+)
G687261 NA non-coding downstream 24002 23574415 ~ 23574615 (+)
G687268 NA non-coding downstream 31165 23581578 ~ 23581787 (+)
G687278 NA non-coding downstream 58755 23609168 ~ 23609986 (+)
G686448 LOC106571417 other upstream 577095 22946501 ~ 22972836 (+)
G685551 NA other upstream 1067792 22480323 ~ 22482139 (+)
G685469 NA other upstream 1101858 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1116896 22419790 ~ 22433035 (+)
LOC110529210 ift172 other downstream 434032 23961761 ~ 23991295 (+)
G688613 NA other downstream 1432316 24982729 ~ 24984826 (+)
G688823 NA other downstream 1508540 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2128239 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2582778 26133191 ~ 26195544 (+)

Expression


Co-expression Network