Gene
RNA
| Item | Value |
|---|---|
| gene id | G687921 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 23623145 ~ 23629792 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU783332 | False | 510 | lncRNA | 0.39 | 2 | 23623145 | 23629792 |
| TU783333 | True | 510 | lncRNA | 0.39 | 2 | 23623145 | 23629792 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529641 | LOC106571433 | coding | downstream | 40163 | 23527630 ~ 23582982 (-) |
| galnt14 | LOC106571428 | coding | downstream | 257354 | 23260188 ~ 23365791 (-) |
| angel2 | angel2 | coding | downstream | 364023 | 23253587 ~ 23259122 (-) |
| nsl1 | nsl1 | coding | downstream | 420912 | 23199511 ~ 23202233 (-) |
| batf3 | LOC106571544 | coding | downstream | 424895 | 23192564 ~ 23198250 (-) |
| LOC110529644 | NA | coding | upstream | 49039 | 23678831 ~ 23682862 (-) |
| LOC110529645 | NA | coding | upstream | 64669 | 23694461 ~ 23732156 (-) |
| LOC110531080 | LOC106571440 | coding | upstream | 162207 | 23791999 ~ 23805391 (-) |
| trim54 | LOC106571441 | coding | upstream | 253278 | 23883070 ~ 23908520 (-) |
| LOC110529650 | LOC106571443 | coding | upstream | 280709 | 23910501 ~ 23928808 (-) |
| G687920 | NA | non-coding | downstream | 500 | 23622379 ~ 23622645 (-) |
| G687902 | NA | non-coding | downstream | 48458 | 23574457 ~ 23574687 (-) |
| G687873 | NA | non-coding | downstream | 90306 | 23532520 ~ 23532839 (-) |
| G687872 | NA | non-coding | downstream | 90740 | 23531755 ~ 23532405 (-) |
| G687931 | NA | non-coding | upstream | 33568 | 23663360 ~ 23663624 (-) |
| G687932 | NA | non-coding | upstream | 34445 | 23664237 ~ 23664509 (-) |
| G687934 | NA | non-coding | upstream | 36169 | 23665961 ~ 23666177 (-) |
| G687936 | NA | non-coding | upstream | 37839 | 23667631 ~ 23667836 (-) |
| G687940 | NA | non-coding | upstream | 56051 | 23685843 ~ 23731426 (-) |
| LOC110529643 | LOC106571435 | other | downstream | 1899 | 23614938 ~ 23659111 (-) |
| G685953 | NA | other | downstream | 1462103 | 22159030 ~ 22161042 (-) |
| LOC110529207 | sprtn | other | downstream | 1698237 | 21920427 ~ 21926307 (-) |
| G684844 | NA | other | downstream | 2143942 | 21478766 ~ 21479203 (-) |
| G681659 | NA | other | downstream | 4831008 | 18791230 ~ 18792137 (-) |
| G687890 | NA | other | upstream | 5517 | 23635309 ~ 23637408 (-) |
| G687979 | LOC106571438 | other | upstream | 125040 | 23754832 ~ 23756910 (-) |
| G688109 | NA | other | upstream | 358307 | 23988099 ~ 23988854 (-) |
| G688366 | NA | other | upstream | 795271 | 24425063 ~ 24425553 (-) |
| LOC110529658 | LOC106571450 | other | upstream | 809173 | 24438965 ~ 24446940 (-) |
