G687890


Basic Information

Item Value
gene id G687890
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23635309 ~ 23637408 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU783300
atacatacagtgccttcagaaagtattcagaccccttgactttatccacattttcttatgttacatccttattcaaaaatggataaataaataaaaaatcaacaATCTAAACATCATACCCCATAACGAGAAAATTAACACAGGTTTTTCGAAATGTTAGCTAATTTGTTAAAAATTacaaacagaaatgccttatttacataagtattcagaccctttactatgagactccaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacatgtggtaaattcaattgattagacatgatttggaaaaaaacaagtcatgaggtcaaaggaatccgtagagctccgagataggattgtgttgagccacagatctggggaaaggtaccaaaacatttctgcagcattgaaagtccccaagaacacagtggccttcatcattcttaaatggaagaagtttggaagcaccaagactcttcctagagctggccaaactgagcaatcggtggaaaagggccttggtcagggaggtgaccaacatctctggagagacttgaaaatagctgtgcagcaacgttccctatccaacctgacagagcttgagaggatctgcagagaagaatgggagaacctccccaaatacaggtgtgccaagcttgtagcataatatccccccccccaaaattgaggttgtaatcgctgccaaaggtgctttaacaaagtactgagtaaaaggtttgAATTCCTATATGCGATACTAATTAGCAACAATTTCTAATAACCcgtttatgctttgtcattatgctgtattgtgtgtagtttaatgagggggaaaaaacaatcaaatccattttagaataaagctgtaacgtaacaaaatgtggaaaatgtcacggggtcttaatactttccattcatgcactgtatatgctgcatCAGTTGGTCACAGTTTCCTTAAAAAGAAAATGCCTCGTCacagtatttttgtgcattcaaattgccattgataaaatgcaattgtgcttGCCCACGACCACCATTGGGcaatctgttcacaacgttgacatcagcaaaccgctcgccaacacaacgccatacatgtggtctgcggttgtgaggctggttggacgtactgccaaattctctaaaaacaatgttggaggcggcttacggtagaaaaattaacattcaactctgacaacagctctggtggacattcctgcagtcagcatgccaattgcatgcactCTCAAAatgtgagacatctgtggcattgtgttgtgtgataaaactgcacattttagttgccttttattgtccccagtacaagatgcacctgtgtaatgatcatgatgtttaatgAGCTTCTTGACATGCCGCAATTGCGGATGGATTATCAggcggatggattatcttggcaaatgagaaatgctctctaacaggaatgtaagcaaatttgtgcacaaatgtttTTGATAAATATGTTTTTTGTGTGGATGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU783300 True 1532 TUCP 0.40 2 23635309 23637408

Neighbor

gene id symbol gene type direction distance location
LOC110529641 LOC106571433 coding downstream 52327 23527630 ~ 23582982 (-)
galnt14 LOC106571428 coding downstream 269518 23260188 ~ 23365791 (-)
angel2 angel2 coding downstream 376187 23253587 ~ 23259122 (-)
nsl1 nsl1 coding downstream 433076 23199511 ~ 23202233 (-)
batf3 LOC106571544 coding downstream 437059 23192564 ~ 23198250 (-)
LOC110529644 NA coding upstream 41423 23678831 ~ 23682862 (-)
LOC110529645 NA coding upstream 57053 23694461 ~ 23732156 (-)
LOC110531080 LOC106571440 coding upstream 154591 23791999 ~ 23805391 (-)
trim54 LOC106571441 coding upstream 245662 23883070 ~ 23908520 (-)
LOC110529650 LOC106571443 coding upstream 273093 23910501 ~ 23928808 (-)
G687921 NA non-coding downstream 5517 23623145 ~ 23629792 (-)
G687920 NA non-coding downstream 12664 23622379 ~ 23622645 (-)
G687902 NA non-coding downstream 60622 23574457 ~ 23574687 (-)
G687873 NA non-coding downstream 102470 23532520 ~ 23532839 (-)
G687931 NA non-coding upstream 25952 23663360 ~ 23663624 (-)
G687932 NA non-coding upstream 26829 23664237 ~ 23664509 (-)
G687934 NA non-coding upstream 28553 23665961 ~ 23666177 (-)
G687936 NA non-coding upstream 30223 23667631 ~ 23667836 (-)
G687940 NA non-coding upstream 48435 23685843 ~ 23731426 (-)
LOC110529643 LOC106571435 other downstream 14063 23614938 ~ 23659111 (-)
G685953 NA other downstream 1474267 22159030 ~ 22161042 (-)
LOC110529207 sprtn other downstream 1710401 21920427 ~ 21926307 (-)
G684844 NA other downstream 2156106 21478766 ~ 21479203 (-)
G681659 NA other downstream 4843172 18791230 ~ 18792137 (-)
G687979 LOC106571438 other upstream 117424 23754832 ~ 23756910 (-)
G688109 NA other upstream 350691 23988099 ~ 23988854 (-)
G688366 NA other upstream 787655 24425063 ~ 24425553 (-)
LOC110529658 LOC106571450 other upstream 801557 24438965 ~ 24446940 (-)
G688480 LOC106571453 other upstream 992146 24629554 ~ 24631049 (-)

Expression


Co-expression Network