G687274


Basic Information

Item Value
gene id G687274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23643335 ~ 23644653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782593
CCTGGTGATATCGCGGTGTGATTGACCAATTGGGGACCATAACGGTTCGACTGGTGCACAAACATTCAGCACCATGCCAGCGCCACAGCAGCACAAACTACAGTAGATATCGGGTCAAATATTCTATGGGCGCGCAAACATTCAGCAACACGGACAGCGCCACGATCAGCGCAAACTATCTACCTGCGCACAATTATTTAGGGCAATGGACAGCGCCACGACCAGCGCAAACTGATAGCTAGTAGGCTTATTGTTTTCAGACACAACCTTTGTGCATCACTACAAGAATGACAGGTTTAGGAAACAAAATATATGTCAACTCTTAACAATGGATATGAGAAGCCTAGCAACGTATGCTGAATGTAATAACATGCACAAGTTACTGTTGCCATTGTCAATTACTTTTATTTCTACCCATCTAAACATGGAAGACAATAGCTGTCAGAGGAATTTGGTCAGATTACTGAATTGCCTGGAATCTGCTGCAGTGATGCTTCAATATCAGTCCCAGCATGAGAGACGGTGGGACAGAAAGCCATGACGACACTCTCCTCTGGTGATGTCACCTCAATTAAGCTAGTGGTTACGGTGAGTTGCTGTGTTATGCCCTCATGAGACCCTAGAGTATTCCCAGATACAATAGCTAGTAGAGCTATCCTTGGCACTACAGAGAGAAAAAACATTTAGGTAAAAAATGCCTGTGCTGCAACAATGGTACATTGTGGTACATTCACATGCGTCAAATTTGTTTGCAAAGTATGTCATGAAATACATAGGGGACATTTCGGAAATATGCCCCTGAAGGTGCAGTTGTATCCGCTTTGCAGCTGCACTTTTCTTCACCTGTGCTGCAGTGCAGGGAAACGTAATAAGCTTCCCAACTGTGGGTATAATATCAAGGTTCGATTTATAACAGGTACTTTCTTACCTTTTGGAAAATCCTGCTGCAACAGAGAGAGAAGTTCAGAAATTACCCCAGAAAGTAAACTCTCTCAATTTTGCATCAAAGTTAACAGTTTTTTGGTGCTGTGACTCATTCTGATCACCCATTCAATGTATATTAACTGCTGGGGTTGCTACAGAGAGGTCACAGGGGGGTCCAGTGTAGCCATGTAATTAGTAACCCTGCTGATTGCTTTAATGCTTATGGATTGTTTTTAGTTCCCAAAGCTAATGTCTAGGCTTTAGTTAAGGGGACTAATGCGGTCTTGACGGTCCAGATAAAATATGTTTAATCATTCCTAGGAAAGTGTCTGGACACCAGCATAATACattgtatatttttgttttaagaagctgagggatggagctggagaaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106571437

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782593 True 1319 lncRNA 0.43 1 23643335 23644653

Neighbor

gene id symbol gene type direction distance location
LOC110529642 LOC106571434 coding upstream 28431 23585720 ~ 23614904 (+)
LOC110529640 LOC106571431 coding upstream 122077 23484408 ~ 23524035 (+)
LOC110529639 LOC106571429 coding upstream 237812 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 393549 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 422524 23209228 ~ 23220811 (+)
znf512 LOC106571438 coding downstream 102743 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 185105 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 202536 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 235083 23879736 ~ 23882523 (+)
trnaa-ugc-24 NA coding downstream 310726 23955379 ~ 23955450 (+)
G687282 NA non-coding upstream 4279 23638670 ~ 23639056 (+)
G687278 NA non-coding upstream 33349 23609168 ~ 23609986 (+)
G687268 NA non-coding upstream 61548 23581578 ~ 23581787 (+)
G687261 NA non-coding upstream 68720 23574415 ~ 23574615 (+)
G687256 NA non-coding upstream 73401 23569640 ~ 23569934 (+)
G687285 NA non-coding downstream 13410 23658063 ~ 23659103 (+)
G687290 NA non-coding downstream 23938 23668591 ~ 23668899 (+)
G687292 NA non-coding downstream 27594 23672247 ~ 23672677 (+)
G687293 NA non-coding downstream 28437 23673090 ~ 23695095 (+)
G687251 NA non-coding downstream 33932 23678585 ~ 23722382 (+)
G686448 LOC106571417 other upstream 670499 22946501 ~ 22972836 (+)
G685551 NA other upstream 1161196 22480323 ~ 22482139 (+)
G685469 NA other upstream 1195262 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1210300 22419790 ~ 22433035 (+)
LOC110529210 ift172 other downstream 339792 23961761 ~ 23991295 (+)
G688613 NA other downstream 1338076 24982729 ~ 24984826 (+)
G688823 NA other downstream 1414300 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 2033999 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2488538 26133191 ~ 26195544 (+)

Expression


Co-expression Network