Gene
RNA
| Item | Value |
|---|---|
| gene id | G687297 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 23681618 ~ 23682987 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110529644 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU782618 | True | 449 | lncRNA | 0.43 | 2 | 23681618 | 23682987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529642 | LOC106571434 | coding | upstream | 66714 | 23585720 ~ 23614904 (+) |
| LOC110529640 | LOC106571431 | coding | upstream | 160360 | 23484408 ~ 23524035 (+) |
| LOC110529639 | LOC106571429 | coding | upstream | 276095 | 23368309 ~ 23405523 (+) |
| vash2 | vash2 | coding | upstream | 431832 | 23221529 ~ 23249786 (+) |
| flvcr1 | flvcr1 | coding | upstream | 460807 | 23209228 ~ 23220811 (+) |
| znf512 | LOC106571438 | coding | downstream | 64409 | 23747396 ~ 23756935 (+) |
| LOC110529209 | LOC105017758 | coding | downstream | 146771 | 23829758 ~ 23839607 (+) |
| LOC110531081 | NA | coding | downstream | 164202 | 23847189 ~ 23872593 (+) |
| LOC110529647 | LOC106571442 | coding | downstream | 196749 | 23879736 ~ 23882523 (+) |
| trnaa-ugc-24 | NA | coding | downstream | 272392 | 23955379 ~ 23955450 (+) |
| G687292 | NA | non-coding | upstream | 8941 | 23672247 ~ 23672677 (+) |
| G687290 | NA | non-coding | upstream | 12719 | 23668591 ~ 23668899 (+) |
| G687285 | NA | non-coding | upstream | 22515 | 23658063 ~ 23659103 (+) |
| G687274 | NA | non-coding | upstream | 36965 | 23643335 ~ 23644653 (+) |
| G687282 | NA | non-coding | upstream | 42562 | 23638670 ~ 23639056 (+) |
| G687334 | LOC106594194 | non-coding | downstream | 53354 | 23736341 ~ 23736614 (+) |
| G687337 | NA | non-coding | downstream | 56456 | 23739443 ~ 23739657 (+) |
| G687344 | NA | non-coding | downstream | 76146 | 23759133 ~ 23759472 (+) |
| G687345 | NA | non-coding | downstream | 76764 | 23759751 ~ 23795155 (+) |
| G687351 | NA | non-coding | downstream | 87319 | 23770306 ~ 23780026 (+) |
| G686448 | LOC106571417 | other | upstream | 708782 | 22946501 ~ 22972836 (+) |
| G685551 | NA | other | upstream | 1199479 | 22480323 ~ 22482139 (+) |
| G685469 | NA | other | upstream | 1233545 | 22446771 ~ 22448073 (+) |
| LOC110529616 | LOC106586086 | other | upstream | 1248583 | 22419790 ~ 22433035 (+) |
| LOC110529210 | ift172 | other | downstream | 301458 | 23961761 ~ 23991295 (+) |
| G688613 | NA | other | downstream | 1299742 | 24982729 ~ 24984826 (+) |
| G688823 | NA | other | downstream | 1375966 | 25058953 ~ 25061450 (+) |
| LOC110529690 | LOC106571476 | other | downstream | 1995665 | 25678604 ~ 25685894 (+) |
| LOC110529702 | LOC106607944 | other | downstream | 2450204 | 26133191 ~ 26195544 (+) |
