Gene
RNA
| Item | Value |
|---|---|
| gene id | G687964 |
| gene name | LOC106594727 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 23736060 ~ 23736363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106594727 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU783376 | True | 304 | lncRNA | 0.38 | 1 | 23736060 | 23736363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529645 | NA | coding | downstream | 3904 | 23694461 ~ 23732156 (-) |
| LOC110529644 | NA | coding | downstream | 53198 | 23678831 ~ 23682862 (-) |
| LOC110529643 | LOC106571435 | coding | downstream | 76949 | 23614938 ~ 23659111 (-) |
| LOC110529641 | LOC106571433 | coding | downstream | 153078 | 23527630 ~ 23582982 (-) |
| galnt14 | LOC106571428 | coding | downstream | 370269 | 23260188 ~ 23365791 (-) |
| LOC110531080 | LOC106571440 | coding | upstream | 55636 | 23791999 ~ 23805391 (-) |
| trim54 | LOC106571441 | coding | upstream | 146707 | 23883070 ~ 23908520 (-) |
| LOC110529650 | LOC106571443 | coding | upstream | 174138 | 23910501 ~ 23928808 (-) |
| cpsaseii | LOC106571444 | coding | upstream | 192573 | 23928936 ~ 23952518 (-) |
| LOC118965656 | NA | coding | upstream | 209413 | 23945776 ~ 23945903 (-) |
| G687940 | NA | non-coding | downstream | 4634 | 23685843 ~ 23731426 (-) |
| G687945 | NA | non-coding | downstream | 7255 | 23692840 ~ 23728805 (-) |
| G687936 | NA | non-coding | downstream | 68224 | 23667631 ~ 23667836 (-) |
| G687934 | NA | non-coding | downstream | 69883 | 23665961 ~ 23666177 (-) |
| G687932 | NA | non-coding | downstream | 71551 | 23664237 ~ 23664509 (-) |
| G687966 | NA | non-coding | upstream | 1343 | 23737706 ~ 23737906 (-) |
| G687969 | NA | non-coding | upstream | 6957 | 23743320 ~ 23743743 (-) |
| G687970 | NA | non-coding | upstream | 8210 | 23744573 ~ 23744774 (-) |
| G687971 | NA | non-coding | upstream | 8532 | 23744895 ~ 23745118 (-) |
| G687973 | NA | non-coding | upstream | 10082 | 23746445 ~ 23746721 (-) |
| G687890 | NA | other | downstream | 98652 | 23635309 ~ 23637408 (-) |
| G685953 | NA | other | downstream | 1575018 | 22159030 ~ 22161042 (-) |
| LOC110529207 | sprtn | other | downstream | 1811152 | 21920427 ~ 21926307 (-) |
| G684844 | NA | other | downstream | 2256857 | 21478766 ~ 21479203 (-) |
| G687979 | LOC106571438 | other | upstream | 18469 | 23754832 ~ 23756910 (-) |
| G688109 | NA | other | upstream | 251736 | 23988099 ~ 23988854 (-) |
| G688366 | NA | other | upstream | 688700 | 24425063 ~ 24425553 (-) |
| LOC110529658 | LOC106571450 | other | upstream | 702602 | 24438965 ~ 24446940 (-) |
| G688480 | LOC106571453 | other | upstream | 893191 | 24629554 ~ 24631049 (-) |
