G687337


Basic Information

Item Value
gene id G687337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23739443 ~ 23739657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782670
TTTAGATGCCTCCCGGTAGCCAGGAATAGATTGTAAAATTCTCGCACAGATATGTTAAATTGCAGTTGGAAAGCCTTAGCAGGGACCTGACGTCCGTCCTGACAGAGAGCTACATACTCTGCATTGAAGTGTTCAAAATTAAATGGGTTTTTATGTAAGCTGCCCGTATTAGAGGCGTTATCCCCCAATCCTATAACAATGTATCAGGGTAGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782670 True 215 lncRNA 0.43 1 23739443 23739657

Neighbor

gene id symbol gene type direction distance location
LOC110529642 LOC106571434 coding upstream 124539 23585720 ~ 23614904 (+)
LOC110529640 LOC106571431 coding upstream 218185 23484408 ~ 23524035 (+)
LOC110529639 LOC106571429 coding upstream 333920 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 489657 23221529 ~ 23249786 (+)
flvcr1 flvcr1 coding upstream 518632 23209228 ~ 23220811 (+)
znf512 LOC106571438 coding downstream 7739 23747396 ~ 23756935 (+)
LOC110529209 LOC105017758 coding downstream 90101 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 107532 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 140079 23879736 ~ 23882523 (+)
trnaa-ugc-24 NA coding downstream 215722 23955379 ~ 23955450 (+)
G687334 LOC106594194 non-coding upstream 2829 23736341 ~ 23736614 (+)
G687299 NA non-coding upstream 16209 23681103 ~ 23723234 (+)
G687251 NA non-coding upstream 17061 23678585 ~ 23722382 (+)
G687295 NA non-coding upstream 41971 23681225 ~ 23697472 (+)
G687293 NA non-coding upstream 44348 23673090 ~ 23695095 (+)
G687344 NA non-coding downstream 19476 23759133 ~ 23759472 (+)
G687345 NA non-coding downstream 20094 23759751 ~ 23795155 (+)
G687351 NA non-coding downstream 30649 23770306 ~ 23780026 (+)
G687438 NA non-coding downstream 170895 23910552 ~ 23913767 (+)
G687449 NA non-coding downstream 188805 23928462 ~ 23932025 (+)
G686448 LOC106571417 other upstream 766607 22946501 ~ 22972836 (+)
G685551 NA other upstream 1257304 22480323 ~ 22482139 (+)
G685469 NA other upstream 1291370 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1306408 22419790 ~ 22433035 (+)
LOC110529210 ift172 other downstream 244788 23961761 ~ 23991295 (+)
G688613 NA other downstream 1243072 24982729 ~ 24984826 (+)
G688823 NA other downstream 1319296 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 1938995 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2393534 26133191 ~ 26195544 (+)

Expression


Co-expression Network