G687344


Basic Information

Item Value
gene id G687344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23759133 ~ 23759472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782677
gggggtgcagggtccgtcatggtctggggtggtgtgtcacagcatcatcggactgagctgtgcgttacaggggagacatcctcctccctcatgtgtttATCATCcttcaggctcatcctgacatgaccctccagcatgacaatgccaccaaccatactgctcgttctgtgcgtgatttcctgcaagacaggaatgtcagtgttctgccatggccagcaaagagcccggatctcaatcccattgagcacgtccgGGACCTGtttgatcggagggtgagggcaagggccattccccccagaaatgtccgggaacttgcaggtgccttggtggaagagtgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782677 True 340 lncRNA 0.57 1 23759133 23759472

Neighbor

gene id symbol gene type direction distance location
znf512 LOC106571438 coding upstream 2198 23747396 ~ 23756935 (+)
LOC110529642 LOC106571434 coding upstream 144229 23585720 ~ 23614904 (+)
LOC110529640 LOC106571431 coding upstream 237875 23484408 ~ 23524035 (+)
LOC110529639 LOC106571429 coding upstream 353610 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 509347 23221529 ~ 23249786 (+)
LOC110529209 LOC105017758 coding downstream 70286 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 87717 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 120264 23879736 ~ 23882523 (+)
trnaa-ugc-24 NA coding downstream 195907 23955379 ~ 23955450 (+)
LOC110529210 ift172 coding downstream 205500 23961761 ~ 23991295 (+)
G687337 NA non-coding upstream 19476 23739443 ~ 23739657 (+)
G687334 LOC106594194 non-coding upstream 22519 23736341 ~ 23736614 (+)
G687299 NA non-coding upstream 35899 23681103 ~ 23723234 (+)
G687251 NA non-coding upstream 36751 23678585 ~ 23722382 (+)
G687345 NA non-coding downstream 279 23759751 ~ 23795155 (+)
G687351 NA non-coding downstream 10834 23770306 ~ 23780026 (+)
G687438 NA non-coding downstream 151080 23910552 ~ 23913767 (+)
G687449 NA non-coding downstream 168990 23928462 ~ 23932025 (+)
G686448 LOC106571417 other upstream 786297 22946501 ~ 22972836 (+)
G685551 NA other upstream 1276994 22480323 ~ 22482139 (+)
G685469 NA other upstream 1311060 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1326098 22419790 ~ 22433035 (+)
G688613 NA other downstream 1223257 24982729 ~ 24984826 (+)
G688823 NA other downstream 1299481 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 1919180 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2373719 26133191 ~ 26195544 (+)

Expression


Co-expression Network