G687345


Basic Information

Item Value
gene id G687345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23759751 ~ 23795155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU782678
aaatgtatatCCGGACCTTTACCACCTAGGAAATGTATAACCGGACCTTTACCACCTAGGAAATGTATAACCGGACCTTTACCATCTAGGAAATGTATAACCGGACCTTTACCACCTAGGAAATGTATAACCGGACCTTCTCAAATGGTACTTGAGTACCCCTGTTTTAGATGCTATTGATGATGAATGAGTCTCATGAATGAAAGTACAGGCTGTGTTTAAAATAAAAACAACCCAAGTTTTGATTCCCATTACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU782678 True 258 lncRNA 0.39 2 23759751 23795155

Neighbor

gene id symbol gene type direction distance location
znf512 LOC106571438 coding upstream 2816 23747396 ~ 23756935 (+)
LOC110529642 LOC106571434 coding upstream 144847 23585720 ~ 23614904 (+)
LOC110529640 LOC106571431 coding upstream 238493 23484408 ~ 23524035 (+)
LOC110529639 LOC106571429 coding upstream 354228 23368309 ~ 23405523 (+)
vash2 vash2 coding upstream 509965 23221529 ~ 23249786 (+)
LOC110529209 LOC105017758 coding downstream 34603 23829758 ~ 23839607 (+)
LOC110531081 NA coding downstream 52034 23847189 ~ 23872593 (+)
LOC110529647 LOC106571442 coding downstream 84581 23879736 ~ 23882523 (+)
trnaa-ugc-24 NA coding downstream 160224 23955379 ~ 23955450 (+)
LOC110529210 ift172 coding downstream 169817 23961761 ~ 23991295 (+)
G687344 NA non-coding upstream 279 23759133 ~ 23759472 (+)
G687337 NA non-coding upstream 20094 23739443 ~ 23739657 (+)
G687334 LOC106594194 non-coding upstream 23137 23736341 ~ 23736614 (+)
G687299 NA non-coding upstream 36517 23681103 ~ 23723234 (+)
G687438 NA non-coding downstream 115397 23910552 ~ 23913767 (+)
G687449 NA non-coding downstream 133307 23928462 ~ 23932025 (+)
G687504 NA non-coding downstream 256132 24051287 ~ 24052635 (+)
G687522 NA non-coding downstream 305118 24100273 ~ 24100669 (+)
G686448 LOC106571417 other upstream 786915 22946501 ~ 22972836 (+)
G685551 NA other upstream 1277612 22480323 ~ 22482139 (+)
G685469 NA other upstream 1311678 22446771 ~ 22448073 (+)
LOC110529616 LOC106586086 other upstream 1326716 22419790 ~ 22433035 (+)
G688613 NA other downstream 1187574 24982729 ~ 24984826 (+)
G688823 NA other downstream 1263798 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 1883497 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 2338036 26133191 ~ 26195544 (+)

Expression


Co-expression Network