G688167


Basic Information

Item Value
gene id G688167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 24084060 ~ 24116642 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU783618
CATTTTAATCATTTAATCCACCAACACCCCATAGAGTTCAATCTGATATACATACTGGTACATACTGTGGTACATACTGGTACATGATGGGGTACATACCAGTACATAATGGGGTACATATTGGGGTACATACTGGTACATACTGGTGTATATACTGGGGTACATACCGGTACATATGCTGGGGTACATACAGGGGTACATATTGGTACATACTGGGGTACACACTGGGGGTGATTTGATTGAAACAAGACAATGTTCTTTCATTTACGTTTGTAGTGATTGATTACCAAAGCATTTGAAATAAAACTCAGATATGAACTTCCTTACTGCATCGGAATGAAGGCAACTTCCATTTCAATTAATAGAAACTAGACTTGTCAAACAAAACTAGCCAATCGGATAGGTTGGTGGTCATTCCCTATTGGACAGAGGTGGTTATTTCTTGAGTCCTATTGGACAGGAGACTCCAGTGCCGCTGAGGCCACAGTATCCATGGGGGTTCTTGCTGAGGTACTGCTGGTGGTAGTCCTCAGCATAGTAGAACTCATGGGCCTCGGCTATCTCTGTGGTGATTTCTCCAAAGCCCCCCTCTATCAGGACCTgtGTATGTATGCTCTGTTCTGCCGATGAAGAGGTGGAGCATTGCTC

Function

NR:

description
mitochondrial peptide methionine sulfoxide reductase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU783618 True 648 lncRNA 0.44 3 24084060 24116642

Neighbor

gene id symbol gene type direction distance location
si:dkey-221h15.4 LOC106571445 coding downstream 128302 23952710 ~ 23955758 (-)
cpsaseii LOC106571444 coding downstream 131542 23928936 ~ 23952518 (-)
LOC118965656 NA coding downstream 138157 23945776 ~ 23945903 (-)
LOC110529650 LOC106571443 coding downstream 155252 23910501 ~ 23928808 (-)
trim54 LOC106571441 coding downstream 175540 23883070 ~ 23908520 (-)
LOC110529653 rcan2 coding upstream 9116 24125758 ~ 24243880 (-)
LOC110529654 NA coding upstream 166749 24283391 ~ 24290109 (-)
ncoa1 LOC106571447 coding upstream 181300 24297942 ~ 24397937 (-)
LOC118965504 NA coding upstream 288269 24404911 ~ 24411834 (-)
LOC110529659 LOC106571449 coding upstream 319855 24436497 ~ 24438647 (-)
G688000 NA non-coding downstream 240956 23789230 ~ 23843104 (-)
G688024 NA non-coding downstream 260603 23822905 ~ 23823457 (-)
G687973 NA non-coding downstream 337339 23746445 ~ 23746721 (-)
G687971 NA non-coding downstream 338942 23744895 ~ 23745118 (-)
G687970 NA non-coding downstream 339286 23744573 ~ 23744774 (-)
G688191 NA non-coding upstream 898 24117540 ~ 24117785 (-)
G688192 NA non-coding upstream 1571 24118213 ~ 24118420 (-)
G688338 rpl7l1 non-coding upstream 262661 24379303 ~ 24401141 (-)
G688369 NA non-coding upstream 313235 24429877 ~ 24434825 (-)
G688375 NA non-coding upstream 329179 24445821 ~ 24446118 (-)
G688109 NA other downstream 95206 23988099 ~ 23988854 (-)
G687979 LOC106571438 other downstream 327150 23754832 ~ 23756910 (-)
G687890 NA other downstream 446652 23635309 ~ 23637408 (-)
LOC110529643 LOC106571435 other downstream 462814 23614938 ~ 23659111 (-)
G685953 NA other downstream 1923018 22159030 ~ 22161042 (-)
G688366 NA other upstream 308421 24425063 ~ 24425553 (-)
LOC110529658 LOC106571450 other upstream 322323 24438965 ~ 24446940 (-)
G688480 LOC106571453 other upstream 512912 24629554 ~ 24631049 (-)
G688537 NA other upstream 564325 24680967 ~ 24681426 (-)
G688922 NA other upstream 619404 24736046 ~ 24737040 (-)

Expression


Co-expression Network