G688366


Basic Information

Item Value
gene id G688366
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 24425063 ~ 24425553 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU783833
GGTTATTATAGAGGTAGCTATTCCTAAGGTTATTATAGAGGTAGCTAGTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTTATGGAGGTAGCTATTCCTAAGGTTGTTAAGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTTATGGAGGTAGCTATTCCTAAGGTTATTATAGAGGTAGCTAGTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTC
>TU783834
GGTTATTATAGAGGTAGCTATTCCTAAGGTTATTATAGAGGTAGCTAGTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTTATGGAGGTAGCTATTCCTAAGGTTGTTAAGGAGGTAGCTAGTCCTAAGGTTGTTATGGAGGTAGCTAGTCCTAAGGTTATTATAGAGGTAGCTATTCCTAAGGTTATTATAGAGGTAGCTAGTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTCATGGAGGTAGCTATTCCTAAGGTTGTC

Function

NR:

description
PREDICTED: extensin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU783833 False 412 TUCP 0.42 2 24425063 24425553
TU783834 True 385 TUCP 0.42 2 24425063 24425553

Neighbor

gene id symbol gene type direction distance location
LOC118965504 NA coding downstream 13229 24404911 ~ 24411834 (-)
ncoa1 LOC106571447 coding downstream 27126 24297942 ~ 24397937 (-)
LOC110529654 NA coding downstream 134954 24283391 ~ 24290109 (-)
LOC110529653 rcan2 coding downstream 181183 24125758 ~ 24243880 (-)
si:dkey-221h15.4 LOC106571445 coding downstream 469305 23952710 ~ 23955758 (-)
LOC110529659 LOC106571449 coding upstream 10944 24436497 ~ 24438647 (-)
LOC110529658 LOC106571450 coding upstream 13414 24438965 ~ 24446940 (-)
srp09 srp09 coding upstream 22040 24447416 ~ 24449348 (-)
LOC110529662 LOC106571455 coding upstream 313504 24739057 ~ 24795416 (-)
LOC110529665 LOC106571552 coding upstream 566982 24992535 ~ 25010299 (-)
G688338 rpl7l1 non-coding downstream 23922 24379303 ~ 24401141 (-)
G688192 NA non-coding downstream 306643 24118213 ~ 24118420 (-)
G688191 NA non-coding downstream 307278 24117540 ~ 24117785 (-)
G688167 NA non-coding downstream 308421 24084060 ~ 24116642 (-)
G688038 NA non-coding downstream 330133 23843168 ~ 24094930 (-)
G688369 NA non-coding upstream 4324 24429877 ~ 24434825 (-)
G688375 NA non-coding upstream 20268 24445821 ~ 24446118 (-)
G688446 NA non-coding upstream 136500 24562053 ~ 24586713 (-)
G688464 NA non-coding upstream 165782 24591335 ~ 24591789 (-)
G688109 NA other downstream 436209 23988099 ~ 23988854 (-)
G687979 LOC106571438 other downstream 668153 23754832 ~ 23756910 (-)
G687890 NA other downstream 787655 23635309 ~ 23637408 (-)
LOC110529643 LOC106571435 other downstream 803817 23614938 ~ 23659111 (-)
G685953 NA other downstream 2264021 22159030 ~ 22161042 (-)
G688480 LOC106571453 other upstream 204001 24629554 ~ 24631049 (-)
G688537 NA other upstream 255414 24680967 ~ 24681426 (-)
G688922 NA other upstream 310493 24736046 ~ 24737040 (-)

Expression


Co-expression Network