G688922


Basic Information

Item Value
gene id G688922
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 24736046 ~ 24737040 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU784418
ttccgagacttgtccagaagccactcctgcgttctcTTCattgtgtgctttgggtcgttgtcctgttggaaggtgaaccttcaccccagtctgaggtcctgagcgtgctgaagaaggttttcatcaatgatctctctgtactttgctccgttcatctttgcttcgatcctgactagtctcccagtccctgccgctgaaaaacatccccacagcaggatgatgacaccaccatgcttcaccctagggatggtgtcaggtttcctccagacttgacacttggcattcaggtcaaagagttcaatcttggtttcatcagaccagagaatcttgtttttcatggtctgagagtctttaggtgccttttggcaaactccaagcaggatgtcatgtgcctttcactgaggagtggcttccgtctggccactctaccataaaggcctgattggtggagtgctgcagagatggttgtccttctggaagattctcccatctccacagaggaactctggagctctgtcagagtgaccatctggttcttggtcacctccctgaccaaggcccatctcccccgattgctcagtttggcctggcgtccagctctaggaagagtcttggtggttccaaacttttaagaatgattgaggccaagattgatcaaatacaaattgttcttggggaccttcaatgctgcagacattttttggaacccttccccagatctgtgcctcaacacaatcctgtctcggagctctacggacaattccttcgacctcatggcttggtttttgctctgacatgcactgtcaactgtgggaccttatatagacaggtatgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggactacaatcaagttgtagaaacatctcaagtatgatcaatggaaacaggatgcacctgaactcaatttcgagtctcatagcaaagggtctgaatacttatgtaaataaggtatttc

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU784418 True 995 TUCP 0.47 1 24736046 24737040

Neighbor

gene id symbol gene type direction distance location
srp09 srp09 coding downstream 286711 24447416 ~ 24449348 (-)
LOC110529658 LOC106571450 coding downstream 289106 24438965 ~ 24446940 (-)
LOC110529659 LOC106571449 coding downstream 297399 24436497 ~ 24438647 (-)
LOC118965504 NA coding downstream 324212 24404911 ~ 24411834 (-)
ncoa1 LOC106571447 coding downstream 338109 24297942 ~ 24397937 (-)
LOC110529662 LOC106571455 coding upstream 2017 24739057 ~ 24795416 (-)
LOC110529665 LOC106571552 coding upstream 255495 24992535 ~ 25010299 (-)
cd2ap LOC106571457 coding upstream 323647 25060687 ~ 25134641 (-)
mep1a.2 LOC106571460 coding upstream 539416 25276456 ~ 25288041 (-)
LOC110529672 LOC106571463 coding upstream 553169 25290209 ~ 25294380 (-)
G688605 NA non-coding downstream 3950 24731830 ~ 24732096 (-)
G688584 NA non-coding downstream 22792 24712988 ~ 24713254 (-)
G688583 NA non-coding downstream 23292 24712465 ~ 24712754 (-)
G688564 NA non-coding downstream 34113 24701506 ~ 24701933 (-)
G688491 NA non-coding downstream 83152 24652530 ~ 24652894 (-)
G689056 NA non-coding upstream 191117 24928157 ~ 24928433 (-)
G689069 NA non-coding upstream 218458 24955498 ~ 24955718 (-)
G689070 NA non-coding upstream 219522 24956562 ~ 24956818 (-)
G689073 NA non-coding upstream 222780 24959820 ~ 24960028 (-)
G689082 NA non-coding upstream 239971 24977011 ~ 24979552 (-)
G688537 NA other downstream 54620 24680967 ~ 24681426 (-)
G688480 LOC106571453 other downstream 104997 24629554 ~ 24631049 (-)
G688366 NA other downstream 310493 24425063 ~ 24425553 (-)
G688109 NA other downstream 747192 23988099 ~ 23988854 (-)
G689656 tlr5m other upstream 639082 25376122 ~ 25407347 (-)
G689685 NA other upstream 673783 25410823 ~ 25411132 (-)
G689723 rad51 other upstream 780526 25517566 ~ 25521288 (-)
G689810 LOC106571475 other upstream 927125 25664165 ~ 25664665 (-)

Expression


Co-expression Network