Gene
RNA
| Item | Value |
|---|---|
| gene id | G689073 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 24959820 ~ 24960028 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU784576 | True | 209 | lncRNA | 0.53 | 1 | 24959820 | 24960028 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529662 | LOC106571455 | coding | downstream | 164404 | 24739057 ~ 24795416 (-) |
| srp09 | srp09 | coding | downstream | 510485 | 24447416 ~ 24449348 (-) |
| LOC110529658 | LOC106571450 | coding | downstream | 512880 | 24438965 ~ 24446940 (-) |
| LOC110529659 | LOC106571449 | coding | downstream | 521173 | 24436497 ~ 24438647 (-) |
| LOC118965504 | NA | coding | downstream | 547986 | 24404911 ~ 24411834 (-) |
| LOC110529665 | LOC106571552 | coding | upstream | 32507 | 24992535 ~ 25010299 (-) |
| cd2ap | LOC106571457 | coding | upstream | 100659 | 25060687 ~ 25134641 (-) |
| mep1a.2 | LOC106571460 | coding | upstream | 316428 | 25276456 ~ 25288041 (-) |
| LOC110529672 | LOC106571463 | coding | upstream | 330181 | 25290209 ~ 25294380 (-) |
| LOC110529673 | LOC106571464 | coding | upstream | 336372 | 25296400 ~ 25304057 (-) |
| G689070 | NA | non-coding | downstream | 3002 | 24956562 ~ 24956818 (-) |
| G689069 | NA | non-coding | downstream | 4102 | 24955498 ~ 24955718 (-) |
| G689056 | NA | non-coding | downstream | 31387 | 24928157 ~ 24928433 (-) |
| G688605 | NA | non-coding | downstream | 227724 | 24731830 ~ 24732096 (-) |
| G688584 | NA | non-coding | downstream | 246566 | 24712988 ~ 24713254 (-) |
| G689082 | NA | non-coding | upstream | 16983 | 24977011 ~ 24979552 (-) |
| G689083 | NA | non-coding | upstream | 27090 | 24987118 ~ 24987357 (-) |
| G689089 | NA | non-coding | upstream | 43279 | 25003307 ~ 25003535 (-) |
| G689092 | NA | non-coding | upstream | 48500 | 25008528 ~ 25008737 (-) |
| G688922 | NA | other | downstream | 222780 | 24736046 ~ 24737040 (-) |
| G688537 | NA | other | downstream | 278394 | 24680967 ~ 24681426 (-) |
| G688480 | LOC106571453 | other | downstream | 328771 | 24629554 ~ 24631049 (-) |
| G688366 | NA | other | downstream | 534267 | 24425063 ~ 24425553 (-) |
| G689656 | tlr5m | other | upstream | 416094 | 25376122 ~ 25407347 (-) |
| G689685 | NA | other | upstream | 450795 | 25410823 ~ 25411132 (-) |
| G689723 | rad51 | other | upstream | 557538 | 25517566 ~ 25521288 (-) |
| G689810 | LOC106571475 | other | upstream | 704137 | 25664165 ~ 25664665 (-) |
