Gene
RNA
| Item | Value |
|---|---|
| gene id | G688783 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 24996100 ~ 24996541 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU784271 | True | 442 | lncRNA | 0.43 | 1 | 24996100 | 24996541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529664 | LOC106571456 | coding | upstream | 16656 | 24942086 ~ 24979444 (+) |
| LOC110529663 | spats1 | coding | upstream | 190634 | 24797849 ~ 24805466 (+) |
| LOC110529661 | LOC106571453 | coding | upstream | 363850 | 24626040 ~ 24632250 (+) |
| lbr | LOC106571452 | coding | upstream | 372234 | 24611307 ~ 24623866 (+) |
| LOC110529212 | enah | coding | upstream | 385537 | 24503815 ~ 24610563 (+) |
| tnfrsf21 | LOC106571462 | coding | downstream | 144236 | 25140777 ~ 25184652 (+) |
| adgrf8 | LOC106571458 | coding | downstream | 200265 | 25196806 ~ 25234163 (+) |
| LOC110529668 | LOC106571459 | coding | downstream | 257638 | 25254179 ~ 25273650 (+) |
| trnas-gcu-5 | NA | coding | downstream | 309690 | 25305888 ~ 25306312 (+) |
| LOC110529679 | NA | coding | downstream | 329812 | 25326353 ~ 25339617 (+) |
| G688782 | NA | non-coding | upstream | 644 | 24995236 ~ 24995456 (+) |
| G688781 | NA | non-coding | upstream | 928 | 24994857 ~ 24995172 (+) |
| G688780 | NA | non-coding | upstream | 1561 | 24994199 ~ 24994539 (+) |
| G688779 | NA | non-coding | upstream | 2030 | 24993820 ~ 24994070 (+) |
| G688778 | NA | non-coding | upstream | 2490 | 24993327 ~ 24993610 (+) |
| G688792 | NA | non-coding | downstream | 8047 | 25004588 ~ 25004822 (+) |
| G688793 | NA | non-coding | downstream | 8413 | 25004954 ~ 25005229 (+) |
| G688795 | NA | non-coding | downstream | 10014 | 25006555 ~ 25006766 (+) |
| G688802 | NA | non-coding | downstream | 20015 | 25016556 ~ 25016860 (+) |
| G688804 | NA | non-coding | downstream | 21798 | 25018339 ~ 25018553 (+) |
| G688613 | NA | other | upstream | 11274 | 24982729 ~ 24984826 (+) |
| LOC110529210 | ift172 | other | upstream | 1005101 | 23961761 ~ 23991295 (+) |
| LOC110529640 | LOC106571431 | other | upstream | 1472065 | 23484408 ~ 23524035 (+) |
| G686448 | LOC106571417 | other | upstream | 2023264 | 22946501 ~ 22972836 (+) |
| G685551 | NA | other | upstream | 2513961 | 22480323 ~ 22482139 (+) |
| G688823 | NA | other | downstream | 62412 | 25058953 ~ 25061450 (+) |
| LOC110529690 | LOC106571476 | other | downstream | 682111 | 25678604 ~ 25685894 (+) |
| LOC110529702 | LOC106607944 | other | downstream | 1136650 | 26133191 ~ 26195544 (+) |
| LOC110529706 | LOC106571495 | other | downstream | 1384587 | 26381097 ~ 26393547 (+) |
| jag2b | LOC106571712 | other | downstream | 2559743 | 27498161 ~ 27602164 (+) |
