G688795


Basic Information

Item Value
gene id G688795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25006555 ~ 25006766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU784283
taatatgtatttgttgtcaatgtttcGGCATCAAACTGGTTGCAGTTGTGAAAAAAAGTGAATAGTTGGAAGATttgcagagttaattgaaaaCAATGCCATTCTTGTATACGTAGatgcttttttcattaattaggctattttctcttgaaccaaaTGGTCTCTACTGGAAACCCATGGACAATATGAACACAGATATAATACATTAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU784283 True 212 lncRNA 0.32 1 25006555 25006766

Neighbor

gene id symbol gene type direction distance location
LOC110529664 LOC106571456 coding upstream 27111 24942086 ~ 24979444 (+)
LOC110529663 spats1 coding upstream 201089 24797849 ~ 24805466 (+)
LOC110529661 LOC106571453 coding upstream 374305 24626040 ~ 24632250 (+)
lbr LOC106571452 coding upstream 382689 24611307 ~ 24623866 (+)
LOC110529212 enah coding upstream 395992 24503815 ~ 24610563 (+)
tnfrsf21 LOC106571462 coding downstream 134011 25140777 ~ 25184652 (+)
adgrf8 LOC106571458 coding downstream 190040 25196806 ~ 25234163 (+)
LOC110529668 LOC106571459 coding downstream 247413 25254179 ~ 25273650 (+)
trnas-gcu-5 NA coding downstream 299465 25305888 ~ 25306312 (+)
LOC110529679 NA coding downstream 319587 25326353 ~ 25339617 (+)
G688793 NA non-coding upstream 1326 25004954 ~ 25005229 (+)
G688792 NA non-coding upstream 1733 25004588 ~ 25004822 (+)
G688783 NA non-coding upstream 10014 24996100 ~ 24996541 (+)
G688782 NA non-coding upstream 11099 24995236 ~ 24995456 (+)
G688781 NA non-coding upstream 11383 24994857 ~ 24995172 (+)
G688802 NA non-coding downstream 9790 25016556 ~ 25016860 (+)
G688804 NA non-coding downstream 11573 25018339 ~ 25018553 (+)
G688836 NA non-coding downstream 48025 25054791 ~ 25055104 (+)
G688821 NA non-coding downstream 49858 25056624 ~ 25057437 (+)
G688822 NA non-coding downstream 50781 25057547 ~ 25058925 (+)
G688613 NA other upstream 21729 24982729 ~ 24984826 (+)
LOC110529210 ift172 other upstream 1015556 23961761 ~ 23991295 (+)
LOC110529640 LOC106571431 other upstream 1482520 23484408 ~ 23524035 (+)
G686448 LOC106571417 other upstream 2033719 22946501 ~ 22972836 (+)
G685551 NA other upstream 2524416 22480323 ~ 22482139 (+)
G688823 NA other downstream 52187 25058953 ~ 25061450 (+)
LOC110529690 LOC106571476 other downstream 671886 25678604 ~ 25685894 (+)
LOC110529702 LOC106607944 other downstream 1126425 26133191 ~ 26195544 (+)
LOC110529706 LOC106571495 other downstream 1374362 26381097 ~ 26393547 (+)
jag2b LOC106571712 other downstream 2549518 27498161 ~ 27602164 (+)

Expression


Co-expression Network