Gene
RNA
| Item | Value |
|---|---|
| gene id | G689201 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 25186026 ~ 25186267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU784714 | True | 242 | lncRNA | 0.43 | 1 | 25186026 | 25186267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tnfrsf21 | LOC106571462 | coding | upstream | 1374 | 25140777 ~ 25184652 (+) |
| LOC110529664 | LOC106571456 | coding | upstream | 206582 | 24942086 ~ 24979444 (+) |
| LOC110529663 | spats1 | coding | upstream | 380560 | 24797849 ~ 24805466 (+) |
| LOC110529661 | LOC106571453 | coding | upstream | 553776 | 24626040 ~ 24632250 (+) |
| lbr | LOC106571452 | coding | upstream | 562160 | 24611307 ~ 24623866 (+) |
| adgrf8 | LOC106571458 | coding | downstream | 10539 | 25196806 ~ 25234163 (+) |
| LOC110529668 | LOC106571459 | coding | downstream | 67912 | 25254179 ~ 25273650 (+) |
| trnas-gcu-5 | NA | coding | downstream | 119964 | 25305888 ~ 25306312 (+) |
| LOC110529679 | NA | coding | downstream | 140086 | 25326353 ~ 25339617 (+) |
| LOC110529215 | tlr5 | coding | downstream | 184643 | 25370910 ~ 25378414 (+) |
| G688822 | NA | non-coding | upstream | 127101 | 25057547 ~ 25058925 (+) |
| G688821 | NA | non-coding | upstream | 128589 | 25056624 ~ 25057437 (+) |
| G688836 | NA | non-coding | upstream | 130922 | 25054791 ~ 25055104 (+) |
| G688804 | NA | non-coding | upstream | 167473 | 25018339 ~ 25018553 (+) |
| G688802 | NA | non-coding | upstream | 169166 | 25016556 ~ 25016860 (+) |
| G689211 | NA | non-coding | downstream | 42022 | 25228289 ~ 25228626 (+) |
| G689226 | NA | non-coding | downstream | 88830 | 25275097 ~ 25275777 (+) |
| G689255 | NA | non-coding | downstream | 108103 | 25294370 ~ 25294755 (+) |
| G688823 | NA | other | upstream | 124576 | 25058953 ~ 25061450 (+) |
| G688613 | NA | other | upstream | 201200 | 24982729 ~ 24984826 (+) |
| LOC110529210 | ift172 | other | upstream | 1195027 | 23961761 ~ 23991295 (+) |
| LOC110529640 | LOC106571431 | other | upstream | 1661991 | 23484408 ~ 23524035 (+) |
| G686448 | LOC106571417 | other | upstream | 2213190 | 22946501 ~ 22972836 (+) |
| LOC110529690 | LOC106571476 | other | downstream | 492385 | 25678604 ~ 25685894 (+) |
| LOC110529702 | LOC106607944 | other | downstream | 946924 | 26133191 ~ 26195544 (+) |
| LOC110529706 | LOC106571495 | other | downstream | 1194861 | 26381097 ~ 26393547 (+) |
| jag2b | LOC106571712 | other | downstream | 2370017 | 27498161 ~ 27602164 (+) |
| G692343 | LOC106571710 | other | downstream | 2709434 | 27895701 ~ 27895987 (+) |
