Gene
RNA
| Item | Value |
|---|---|
| gene id | G689593 |
| gene name | LOC106571458 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 25217015 ~ 25221300 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable G-protein coupled receptor 116 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU785159 | True | 280 | lncRNA | 0.43 | 5 | 25217015 | 25221300 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cd2ap | LOC106571457 | coding | downstream | 82374 | 25060687 ~ 25134641 (-) |
| LOC110529665 | LOC106571552 | coding | downstream | 206716 | 24992535 ~ 25010299 (-) |
| LOC110529662 | LOC106571455 | coding | downstream | 421599 | 24739057 ~ 24795416 (-) |
| srp09 | srp09 | coding | downstream | 767680 | 24447416 ~ 24449348 (-) |
| LOC110529658 | LOC106571450 | coding | downstream | 770075 | 24438965 ~ 24446940 (-) |
| mep1a.2 | LOC106571460 | coding | upstream | 55156 | 25276456 ~ 25288041 (-) |
| LOC110529672 | LOC106571463 | coding | upstream | 68909 | 25290209 ~ 25294380 (-) |
| LOC110529673 | LOC106571464 | coding | upstream | 75100 | 25296400 ~ 25304057 (-) |
| LOC118965601 | NA | coding | upstream | 83119 | 25304419 ~ 25305913 (-) |
| LOC110529678 | LOC106571467 | coding | upstream | 86131 | 25307431 ~ 25309783 (-) |
| G689079 | NA | non-coding | downstream | 158329 | 25057588 ~ 25058686 (-) |
| G689080 | NA | non-coding | downstream | 159633 | 25056785 ~ 25057382 (-) |
| G689096 | NA | non-coding | downstream | 200384 | 25016332 ~ 25016631 (-) |
| G689092 | NA | non-coding | downstream | 208278 | 25008528 ~ 25008737 (-) |
| G689089 | NA | non-coding | downstream | 213480 | 25003307 ~ 25003535 (-) |
| G689606 | NA | non-coding | upstream | 11839 | 25233139 ~ 25236243 (-) |
| G689620 | NA | non-coding | upstream | 31452 | 25252752 ~ 25317597 (-) |
| G689644 | NA | non-coding | upstream | 84339 | 25305639 ~ 25306422 (-) |
| G689659 | NA | non-coding | upstream | 123578 | 25344878 ~ 25345222 (-) |
| G689677 | NA | non-coding | upstream | 177975 | 25399275 ~ 25399585 (-) |
| G688922 | NA | other | downstream | 479975 | 24736046 ~ 24737040 (-) |
| G688537 | NA | other | downstream | 535589 | 24680967 ~ 24681426 (-) |
| G688480 | LOC106571453 | other | downstream | 585966 | 24629554 ~ 24631049 (-) |
| G689656 | tlr5m | other | upstream | 154822 | 25376122 ~ 25407347 (-) |
| G689685 | NA | other | upstream | 189523 | 25410823 ~ 25411132 (-) |
| G689723 | rad51 | other | upstream | 296266 | 25517566 ~ 25521288 (-) |
| G689810 | LOC106571475 | other | upstream | 442865 | 25664165 ~ 25664665 (-) |
| LOC110529694 | LOC106571481 | other | upstream | 580664 | 25801320 ~ 25805570 (-) |
