Gene
RNA
| Item | Value |
|---|---|
| gene id | G689226 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 25275097 ~ 25275777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU784759 | True | 611 | lncRNA | 0.38 | 2 | 25275097 | 25275777 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529668 | LOC106571459 | coding | upstream | 1447 | 25254179 ~ 25273650 (+) |
| adgrf8 | LOC106571458 | coding | upstream | 40934 | 25196806 ~ 25234163 (+) |
| tnfrsf21 | LOC106571462 | coding | upstream | 90445 | 25140777 ~ 25184652 (+) |
| LOC110529664 | LOC106571456 | coding | upstream | 295653 | 24942086 ~ 24979444 (+) |
| LOC110529663 | spats1 | coding | upstream | 469631 | 24797849 ~ 24805466 (+) |
| trnas-gcu-5 | NA | coding | downstream | 30454 | 25305888 ~ 25306312 (+) |
| LOC110529679 | NA | coding | downstream | 50576 | 25326353 ~ 25339617 (+) |
| LOC110529215 | tlr5 | coding | downstream | 95133 | 25370910 ~ 25378414 (+) |
| tlr5m | tlr5m | coding | downstream | 123479 | 25399256 ~ 25407350 (+) |
| knl1 | knl1 | coding | downstream | 229236 | 25484214 ~ 25515202 (+) |
| G689211 | NA | non-coding | upstream | 46471 | 25228289 ~ 25228626 (+) |
| G689201 | NA | non-coding | upstream | 88830 | 25186026 ~ 25186267 (+) |
| G688822 | NA | non-coding | upstream | 216172 | 25057547 ~ 25058925 (+) |
| G689255 | NA | non-coding | downstream | 18593 | 25294370 ~ 25294755 (+) |
| G689270 | brox | non-coding | downstream | 44068 | 25319845 ~ 25320231 (+) |
| G689276 | NA | non-coding | downstream | 57114 | 25332891 ~ 25336225 (+) |
| G688823 | NA | other | upstream | 213647 | 25058953 ~ 25061450 (+) |
| G688613 | NA | other | upstream | 290271 | 24982729 ~ 24984826 (+) |
| LOC110529210 | ift172 | other | upstream | 1284098 | 23961761 ~ 23991295 (+) |
| LOC110529640 | LOC106571431 | other | upstream | 1751062 | 23484408 ~ 23524035 (+) |
| G686448 | LOC106571417 | other | upstream | 2302261 | 22946501 ~ 22972836 (+) |
| LOC110529690 | LOC106571476 | other | downstream | 402875 | 25678604 ~ 25685894 (+) |
| LOC110529702 | LOC106607944 | other | downstream | 857414 | 26133191 ~ 26195544 (+) |
| LOC110529706 | LOC106571495 | other | downstream | 1105351 | 26381097 ~ 26393547 (+) |
| jag2b | LOC106571712 | other | downstream | 2280507 | 27498161 ~ 27602164 (+) |
| G692343 | LOC106571710 | other | downstream | 2619924 | 27895701 ~ 27895987 (+) |
