G689393


Basic Information

Item Value
gene id G689393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25534879 ~ 25535162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU784948
aagctgtacaggagtaccaagtctaggacaaaaaggctcctcaacagtttttaccccaagccataagacccctgaacaggtaatcaaatggttacccggactatttacattgtgtaccccaacccctcttttacgctgctgctactctctgtttatcatatatgcatagtcactttaactatacattcatgtacatactacctcaattggcccgaccaaccagtgttcccgcacattggctaaccgggctatctgcattgtgtcctgtcacccgccacccgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU784948 True 284 lncRNA 0.47 1 25534879 25535162

Neighbor

gene id symbol gene type direction distance location
LOC110529685 LOC106571472 coding upstream 3776 25527213 ~ 25531103 (+)
LOC110529684 rad51 coding upstream 13555 25517487 ~ 25521324 (+)
knl1 knl1 coding upstream 19677 25484214 ~ 25515202 (+)
tlr5m tlr5m coding upstream 127529 25399256 ~ 25407350 (+)
LOC110529215 tlr5 coding upstream 156465 25370910 ~ 25378414 (+)
LOC110529217 LOC106571473 coding downstream 17275 25552437 ~ 25587302 (+)
LOC110529686 pura1 coding downstream 52281 25587443 ~ 25600542 (+)
LOC110529687 LOC106571474 coding downstream 72778 25607940 ~ 25651987 (+)
LOC110529689 LOC106571475 coding downstream 118138 25653300 ~ 25676087 (+)
LOC110529690 LOC106571476 coding downstream 143442 25678604 ~ 25685894 (+)
G689374 NA non-coding upstream 36541 25497597 ~ 25498338 (+)
G689353 NA non-coding upstream 67197 25467429 ~ 25467682 (+)
G689311 NA non-coding upstream 120372 25414192 ~ 25414507 (+)
G689309 NA non-coding upstream 121468 25412001 ~ 25413411 (+)
G689395 NA non-coding downstream 4182 25539344 ~ 25539646 (+)
G689396 NA non-coding downstream 5637 25540799 ~ 25541075 (+)
G689397 LOC106581772 non-coding downstream 6011 25541173 ~ 25541404 (+)
G689490 NA non-coding downstream 178250 25713412 ~ 25713643 (+)
G688823 NA other upstream 473429 25058953 ~ 25061450 (+)
G688613 NA other upstream 550053 24982729 ~ 24984826 (+)
LOC110529210 ift172 other upstream 1543880 23961761 ~ 23991295 (+)
LOC110529640 LOC106571431 other upstream 2010844 23484408 ~ 23524035 (+)
G686448 LOC106571417 other upstream 2562043 22946501 ~ 22972836 (+)
LOC110529702 LOC106607944 other downstream 598029 26133191 ~ 26195544 (+)
LOC110529706 LOC106571495 other downstream 845966 26381097 ~ 26393547 (+)
jag2b LOC106571712 other downstream 2021122 27498161 ~ 27602164 (+)
G692343 LOC106571710 other downstream 2360539 27895701 ~ 27895987 (+)

Expression


Co-expression Network