G689538


Basic Information

Item Value
gene id G689538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25800364 ~ 25800794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU785098
CGACCATTGCAAGTTTGTCCGTCGCACACATGACGAGGTCGGCAGTTGAGAAGTGAGGAAAACACCACCAGCACTGAAAAGAGTTTCCTGTtgctcagtggtgtaaagtagttaagtaaaaatactttaaagtactagttACGTAGTTTTTTTTtggaatctgtactttactatttacatttgactacttttacttcactacattcctaaagaaaatattgtactttttactccatacattttccctgacacccaaatgtactcgttacattttgaatgcttagcaggacaggaaaatggtccaattcacacacttatcaagagaacatccctggtcatccctactgcctctgatctggcggactcactaaacacacatgcttcgtttgtaagtTGTCTGAATATTTGAGTCTGCCCCTGGCTAGtcgtaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU785098 True 431 lncRNA 0.40 1 25800364 25800794

Neighbor

gene id symbol gene type direction distance location
LOC110529691 LOC106571477 coding upstream 66564 25693543 ~ 25733800 (+)
LOC110529690 LOC106571476 coding upstream 114487 25678604 ~ 25685894 (+)
LOC110529689 LOC106571475 coding upstream 124277 25653300 ~ 25676087 (+)
LOC110529687 LOC106571474 coding upstream 148377 25607940 ~ 25651987 (+)
LOC110529686 pura1 coding upstream 199822 25587443 ~ 25600542 (+)
LOC110529695 nagab coding downstream 5107 25805901 ~ 25809907 (+)
LOC110529698 LOC106571483 coding downstream 202801 26003595 ~ 26006629 (+)
LOC110529699 LOC106571484 coding downstream 276703 26077497 ~ 26080970 (+)
ngs LOC106571488 coding downstream 314212 26115006 ~ 26118968 (+)
LOC110529702 LOC106607944 coding downstream 332403 26133191 ~ 26195544 (+)
G689528 NA non-coding upstream 7740 25792348 ~ 25792624 (+)
G689520 NA non-coding upstream 15538 25784614 ~ 25784826 (+)
G689519 NA non-coding upstream 16296 25783781 ~ 25784068 (+)
G689517 NA non-coding upstream 19274 25780859 ~ 25781090 (+)
G689449 NA non-coding upstream 38177 25758907 ~ 25762187 (+)
G689542 LOC100194703 non-coding downstream 10807 25811601 ~ 25811820 (+)
G689543 NA non-coding downstream 15292 25816086 ~ 25856112 (+)
G689929 NA non-coding downstream 78148 25878942 ~ 25879180 (+)
G689969 NA non-coding downstream 112454 25913248 ~ 25913511 (+)
G689987 NA non-coding downstream 124969 25925763 ~ 25925966 (+)
G688823 NA other upstream 738914 25058953 ~ 25061450 (+)
G688613 NA other upstream 815538 24982729 ~ 24984826 (+)
LOC110529210 ift172 other upstream 1809365 23961761 ~ 23991295 (+)
LOC110529640 LOC106571431 other upstream 2276329 23484408 ~ 23524035 (+)
LOC110529706 LOC106571495 other downstream 580334 26381097 ~ 26393547 (+)
jag2b LOC106571712 other downstream 1755490 27498161 ~ 27602164 (+)
G692343 LOC106571710 other downstream 2094907 27895701 ~ 27895987 (+)
xrcc3 xrcc3 other downstream 2169682 27951635 ~ 27972016 (+)

Expression


Co-expression Network