G690021


Basic Information

Item Value
gene id G690021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25955763 ~ 25956270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU785629
gtatttgatacactgccgattttcctACTtaaaaagcatgtagaggtctgtaatctTTCACaaatacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgattttaaagtaattaattaacattttattgcatgacataagtacttgatacatcagaaaagcagaacttaatatttggtacagaaacctttgtttgcaattacagagatcatacgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagaccttctccagatccttcaggtttcggggctgtcgctgggcaatacggactttcagccccctccaaaaatgttctattgggttcaggtctggagactggctaggccactccaggaccttgagatgctttttacggagccactcctcagttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU785629 True 508 lncRNA 0.43 1 25955763 25956270

Neighbor

gene id symbol gene type direction distance location
LOC110529696 LOC106571482 coding downstream 82086 25854580 ~ 25873677 (-)
LOC110529694 LOC106571481 coding downstream 150193 25801320 ~ 25805570 (-)
LOC110529218 NA coding downstream 155369 25796900 ~ 25800394 (-)
LOC110529693 LOC106571480 coding downstream 180735 25758877 ~ 25775028 (-)
LOC110529692 LOC106607895 coding downstream 197413 25744024 ~ 25758350 (-)
LOC110529697 NA coding upstream 36154 25992424 ~ 25998685 (-)
LOC110529219 NA coding upstream 50612 26006882 ~ 26017782 (-)
LOC110529220 LOC106571486 coding upstream 131176 26087446 ~ 26094609 (-)
LOC110529700 LOC106571487 coding upstream 138671 26094941 ~ 26106801 (-)
LOC110531082 pgm3 coding upstream 164195 26120465 ~ 26122280 (-)
G690009 NA non-coding downstream 11818 25943736 ~ 25943945 (-)
G689981 NA non-coding downstream 34280 25920824 ~ 25921483 (-)
G689966 NA non-coding downstream 47455 25907992 ~ 25908308 (-)
G689895 NA non-coding downstream 144366 25811055 ~ 25811397 (-)
G689883 NA non-coding downstream 176401 25779126 ~ 25779362 (-)
G690047 NA non-coding upstream 17269 25973539 ~ 25973784 (-)
G690074 NA non-coding upstream 35456 25991726 ~ 25992018 (-)
G690093 NA non-coding upstream 43989 26000259 ~ 26000550 (-)
G690096 NA non-coding upstream 50851 26007121 ~ 26007345 (-)
G689810 LOC106571475 other downstream 291098 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 434475 25517566 ~ 25521288 (-)
G689685 NA other downstream 544631 25410823 ~ 25411132 (-)
G689656 tlr5m other downstream 548416 25376122 ~ 25407347 (-)
G690033 NA other upstream 8909 25965179 ~ 25965493 (-)
G690073 NA other upstream 34408 25990678 ~ 25991143 (-)
cenpw LOC106571497 other upstream 472845 26428702 ~ 26430888 (-)
G691447 LOC106571509 other upstream 907940 26864210 ~ 26868078 (-)
G691747 NA other upstream 1359298 27315568 ~ 27315935 (-)

Expression


Co-expression Network