Gene
RNA
| Item | Value |
|---|---|
| gene id | G690697 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 26244510 ~ 26244983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: THAP domain-containing protein 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU786408 | False | 474 | lncRNA | 0.41 | 1 | 26244510 | 26244983 |
| TU786409 | True | 412 | lncRNA | 0.40 | 1 | 26244510 | 26244921 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529703 | LOC106571490 | coding | downstream | 68871 | 26172446 ~ 26175639 (-) |
| LOC110531082 | pgm3 | coding | downstream | 122230 | 26120465 ~ 26122280 (-) |
| LOC110529700 | LOC106571487 | coding | downstream | 137709 | 26094941 ~ 26106801 (-) |
| LOC110529220 | LOC106571486 | coding | downstream | 149901 | 26087446 ~ 26094609 (-) |
| LOC110529219 | NA | coding | downstream | 226728 | 26006882 ~ 26017782 (-) |
| LOC110529708 | LOC106571496 | coding | upstream | 177512 | 26422495 ~ 26426074 (-) |
| cenpw | LOC106571497 | coding | upstream | 184057 | 26428702 ~ 26430888 (-) |
| LOC110529710 | LOC106571501 | coding | upstream | 199134 | 26444117 ~ 26463361 (-) |
| LOC110529713 | l3hypdh | coding | upstream | 346547 | 26591530 ~ 26596738 (-) |
| LOC110529714 | LOC106571503 | coding | upstream | 354047 | 26599030 ~ 26602934 (-) |
| G690693 | NA | non-coding | downstream | 2338 | 26241923 ~ 26242172 (-) |
| G690692 | NA | non-coding | downstream | 3676 | 26240631 ~ 26240834 (-) |
| G690691 | NA | non-coding | downstream | 4285 | 26239762 ~ 26240225 (-) |
| G690280 | NA | non-coding | downstream | 78129 | 26162614 ~ 26166381 (-) |
| G690237 | NA | non-coding | downstream | 171368 | 26072870 ~ 26073142 (-) |
| G690696 | LOC106613431 | non-coding | upstream | 1344 | 26246327 ~ 26250741 (-) |
| G690698 | NA | non-coding | upstream | 8178 | 26253161 ~ 26253395 (-) |
| G690699 | NA | non-coding | upstream | 8761 | 26253744 ~ 26253986 (-) |
| G690700 | NA | non-coding | upstream | 11098 | 26256081 ~ 26256621 (-) |
| G690705 | NA | non-coding | upstream | 19931 | 26264914 ~ 26326435 (-) |
| G690073 | NA | other | downstream | 253367 | 25990678 ~ 25991143 (-) |
| G690033 | NA | other | downstream | 279017 | 25965179 ~ 25965493 (-) |
| LOC110529694 | LOC106571481 | other | downstream | 439035 | 25801320 ~ 25805570 (-) |
| G689810 | LOC106571475 | other | downstream | 579845 | 25664165 ~ 25664665 (-) |
| G689723 | rad51 | other | downstream | 723222 | 25517566 ~ 25521288 (-) |
| G691447 | LOC106571509 | other | upstream | 619227 | 26864210 ~ 26868078 (-) |
| G691747 | NA | other | upstream | 1070585 | 27315568 ~ 27315935 (-) |
| G692859 | NA | other | upstream | 1870753 | 28115736 ~ 28116048 (-) |
| si:dkey-85n7.8 | NA | other | upstream | 2233834 | 28478817 ~ 28481944 (-) |
